Factsheet for TraesCS5D01G382500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G375000.1	Wheat	nucleus	94.29	94.72
TraesCS5A01G373000.1	Wheat	nucleus	94.29	94.72
HORVU5Hr1G092660.2	Barley	nucleus	91.78	91.78
Os03t0648300-01	Rice	cytosol	72.15	71.82
EER91163	Sorghum	cytosol	65.53	68.01
Zm00001d033211_P002	Maize	cytosol	65.53	66.9
TraesCS5D01G037300.2	Wheat	nucleus	54.11	55.12
GSMUA_Achr4P31410_001	Banana	cytosol	45.89	45.68
Bra031331.1-P	Field mustard	cytosol	38.36	43.75
KRH26707	Soybean	cytosol	42.01	43.6
CDY37387	Canola	cytosol	38.13	43.49
GSMUA_Achr5P02600_001	Banana	cytosol	42.92	42.82
KRH22612	Soybean	cytosol	41.32	42.59
CDX92933	Canola	cytosol, plastid	38.81	42.39
CDY24286	Canola	cytosol	39.04	42.33
CDY10618	Canola	cytosol	38.58	41.63
GSMUA_Achr4P22800_001	Banana	cytosol	40.87	41.24
AT3G22190.2	Thale cress	cytosol	39.27	40.76
VIT_06s0009g00210.t01	Wine grape	cytosol	41.1	40.45
Solyc11g071840.1.1	Tomato	cytosol	40.87	39.96
KRH39086	Soybean	cytosol	39.27	39.63
CDY39505	Canola	cytosol	34.25	37.97
CDX92931	Canola	mitochondrion, nucleus	21.92	37.65
Bra001855.1-P	Field mustard	cytosol	29.22	37.32
CDY58749	Canola	cytosol	36.07	34.65
Bra023846.1-P	Field mustard	cytosol	32.88	34.53
CDY24282	Canola	mitochondrion	22.15	31.8
TraesCS3D01G107700.1	Wheat	cytosol	26.48	26.67
TraesCS7D01G107600.2	Wheat	nucleus	18.72	25.08
TraesCS3D01G251800.2	Wheat	cytosol	23.97	23.7
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	21.92	21.29
TraesCS1D01G064700.1	Wheat	cytosol	23.06	21.13
TraesCS3D01G346500.1	Wheat	cytosol	23.06	20.24
TraesCS3D01G543500.1	Wheat	cytosol	22.6	19.96
TraesCS1D01G287100.2	Wheat	cytosol	18.72	15.5
TraesCS3D01G392900.1	Wheat	cytosol	17.58	12.38

Protein Annotations

EnsemblPlants:TraesCS5D01G382500.1	EnsemblPlantsGene:TraesCS5D01G382500	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF31	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr5D:+:452235513..452241391

Molecular Weight (calculated)

48187.5 Da

IEP (calculated)

10.422

GRAVY (calculated)

-0.896

Length

438 amino acids

Sequence
(BLAST)

001: MGISAKWIKS LVRIRKQEKG RSSENQEKAQ NAESSEASSA TRQLHKRKHS LDPTVEELAV PSETSTDGTN TQLASNSISS ESASRDTHVP QTEELPREGD
101: LAATVIQSSF RAFLARRALR ALKGIVLLQA LVRGYIVRKQ TAETLQCMHE LVRAEARVRA RQAGVALENQ VARKKVPGQD DCENHVREIE EGWCGGIGSV
201: AEMQAKVLKR QEAAAKRERA MAYALTHQRQ AGSRQQKPTN LQGSELDDDH WGSNWVERWV AARPWENRLL DNSAKESMPV CDDNQDEEIK PQVTPKGKAP
301: TSSTTTPPNG LNKKKGASHR KSYSDINFTS FGRSSTVLPS TSLGTSKQKP KLEDEAFEEV SSQPTDIAPL AVHNQKERRA QLNTSAKKRL SLPNNVGGGA
401: AKGTTNRNPM NRSSSAKSDP KPRANAPNQA RKQVELQA

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.