Factsheet for TraesCS1D01G367300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G362400.1	Wheat	mitochondrion	87.58	96.58
TraesCS1B01G379600.1	Wheat	mitochondrion	88.03	95.43
HORVU1Hr1G079590.12	Barley	cytosol	81.37	78.42
Os05t0541100-01	Rice	plastid	56.98	62.99
Zm00001d038861_P001	Maize	cytosol, plastid	54.99	57.81
TraesCS3D01G251800.2	Wheat	cytosol	52.11	53.05
KXG22437	Sorghum	mitochondrion, plastid	59.65	49.27
TraesCS3D01G107700.1	Wheat	cytosol	33.92	35.17
CDX72935	Canola	cytosol	19.73	33.84
AT1G17480.1	Thale cress	cytosol	27.49	33.42
Bra025971.1-P	Field mustard	nucleus	27.05	32.53
CDY26241	Canola	nucleus	27.05	32.53
KRH10035	Soybean	cytosol	29.71	32.21
Solyc03g121760.2.1	Tomato	cytosol	30.6	32.17
PGSC0003DMT400006376	Potato	cytosol	30.38	32.08
CDY48305	Canola	nucleus	26.39	31.73
KRH23285	Soybean	nucleus	28.38	31.07
AT1G72670.1	Thale cress	cytosol	28.38	30.92
Bra016042.1-P	Field mustard	cytosol	27.49	30.1
KRH44124	Soybean	mitochondrion	27.05	28.98
KRH47099	Soybean	cytosol	28.82	28.2
TraesCS5D01G037300.2	Wheat	nucleus	22.62	23.72
TraesCS5D01G382500.1	Wheat	nucleus	21.29	21.92
TraesCS7D01G107600.2	Wheat	nucleus	15.52	21.41
TraesCS1D01G064700.1	Wheat	cytosol	22.17	20.92
TraesCS3D01G346500.1	Wheat	cytosol	23.06	20.84
TraesCS3D01G543500.1	Wheat	cytosol	21.73	19.76
TraesCS1D01G287100.2	Wheat	cytosol	20.84	17.77
TraesCS3D01G392900.1	Wheat	cytosol	19.29	13.99

Protein Annotations

EnsemblPlants:TraesCS1D01G367300.2	EnsemblPlantsGene:TraesCS1D01G367300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:447254780..447258284

Molecular Weight (calculated)

49369.1 Da

IEP (calculated)

10.959

GRAVY (calculated)

-0.623

Length

451 amino acids

Sequence
(BLAST)

001: MGKWIKSLVG LKAPSASAAP GKGRKWSRLW RSASRDGAGG CETSSTTSSA SALGSVVAAA ARAPPRDFRV IRQEWAAVRI QAAFRALLVS GNRRADCSMV
101: SCYYVFRSDA ILVFVDELMV SRAVDQARRA LKALRGIVRL QALVRGRLVR RQLAVTLSRM EALLRVQERA MERRARCSAD ALSQDAPGHR DGRADPLRET
201: EERWCDRQGS VNQVKSRMHM KHEGAVKRQR AIAYAHSHQG RSSRYSGRSS SPASSLRNHE SYIEGWMATK PWESTHMDSN LGQSRRLHSY KETINFEDSK
301: YSCAGSTKIR RNNDSARVEA MPPPALSASS SDFGCDESSP STSSVTPGYS ATNTLASEAR SDSGGGPGYM SLTKAAKARL EDVGGSRRGP FQLQRQRSGG
401: VPYYSRRVAL SSLDSESNAG SDVSAAARRL NSLSLKGQSM TRSLDKENYN Y

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.