Factsheet for Bra016042.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72935	Canola	cytosol	57.77	90.49
AT1G72670.1	Thale cress	cytosol	90.29	89.86
Bra025971.1-P	Field mustard	nucleus	64.81	71.2
Solyc03g121760.2.1	Tomato	cytosol	46.6	44.76
PGSC0003DMT400006376	Potato	cytosol	46.36	44.73
Bra034294.1-P	Field mustard	nucleus	41.99	43.58
KRH10035	Soybean	cytosol	43.69	43.27
KRH23285	Soybean	nucleus	41.75	41.75
KRH44124	Soybean	mitochondrion	42.23	41.33
KRH47099	Soybean	cytosol	43.69	39.05
Os05t0541100-01	Rice	plastid	37.14	37.5
TraesCS3B01G280900.1	Wheat	cytosol	37.86	36.28
TraesCS3A01G251400.1	Wheat	cytosol	37.62	35.96
TraesCS3D01G251800.2	Wheat	cytosol	38.11	35.44
Os01t0708700-01	Rice	cytosol	37.62	35.15
EES03502	Sorghum	mitochondrion	37.14	35.01
Zm00001d038861_P001	Maize	cytosol, plastid	36.16	34.73
Zm00001d043691_P001	Maize	mitochondrion	36.65	34.4
HORVU3Hr1G066840.2	Barley	cytosol	34.71	33.57
Bra031331.1-P	Field mustard	cytosol	29.61	31.77
TraesCS1B01G379600.1	Wheat	mitochondrion	31.07	30.77
TraesCS1A01G362400.1	Wheat	mitochondrion	29.61	29.83
Bra021588.1-P	Field mustard	cytosol, plastid	18.2	28.41
KXG22437	Sorghum	mitochondrion, plastid	36.89	27.84
Bra005462.1-P	Field mustard	cytosol, plastid	17.72	27.55
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	30.1	27.49
Bra001855.1-P	Field mustard	cytosol	22.09	26.53
HORVU1Hr1G079590.12	Barley	cytosol	29.85	26.28
Bra023846.1-P	Field mustard	cytosol	25.49	25.18
Bra021888.1-P	Field mustard	plastid	15.29	24.32
Bra028854.1-P	Field mustard	nucleus, plastid	23.54	21.8
Bra000717.1-P	Field mustard	nucleus	22.09	21.06
Bra017988.1-P	Field mustard	nucleus	17.72	20.86
Bra033443.1-P	Field mustard	cytosol	22.33	20.67
Bra017997.1-P	Field mustard	nucleus, plastid	23.54	20.42
Bra019589.1-P	Field mustard	nucleus	23.3	20.21
Bra009554.1-P	Field mustard	cytosol	22.33	19.53
Bra033284.1-P	Field mustard	nucleus	23.06	18.06
Bra007471.1-P	Field mustard	nucleus	21.12	17.54
Bra000930.1-P	Field mustard	mitochondrion, nucleus	21.84	17.14
Bra034081.1-P	Field mustard	nucleus	17.96	16.67
Bra037689.1-P	Field mustard	cytosol	20.15	15.75
Bra000318.1-P	Field mustard	nucleus	21.12	14.62
Bra001299.1-P	Field mustard	nucleus	16.5	14.38
Bra004776.1-P	Field mustard	nucleus	20.15	13.28

Protein Annotations

EnsemblPlants:Bra016042.1	EnsemblPlants:Bra016042.1-P	EnsemblPlantsGene:Bra016042	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF25
PFAM:PF00612	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002541C47
UniProt:M4DHR5	MapMan:35.1	:	:	:	:

Description

AT1G72670 (E=2e-159) iqd8 | iqd8 (IQ-domain 8); calmodulin binding

Coordinates

chrA07:-:19703688..19705417

Molecular Weight (calculated)

45368.4 Da

IEP (calculated)

10.989

GRAVY (calculated)

-0.798

Length

412 amino acids

Sequence
(BLAST)

001: MGGSGNWIKS LISNKKPITD DHQLGDKNSK KKWKLWRTSS ESFISSSKGF KSRAGSYGTP SLGSDPPSFS ADDSFAASVA AVIRAPPKDF LLVKREWAAT
101: RIQAAFRSFL ARQALRALKA VVRIQAIFRG RQVRKQADVT LRCMQALVRV QARVRAHCNR TPSDGQELEK PSEEKNDPAK QAEKGWCDSP GSVNEVRTKL
201: QMRQEGAIKR ERAMVYALTH QPRTCPSPNA KVNKQGSVKK SSGSCKSSPG WNWLDRWVAD RPWEGRFVEG GPANSSDNNA RKSESSVSEH DAVQVRKNSL
301: TTRVVARPPP MSSSATSSET SSTSQSPVPF SGSFLEEGGY YRKPSYMSLT QSIKAKQRRS GSSSSACSRT PFEKKQSMSF NGDVDVKRSA GSDLYPPAQV
401: TGRHMWAKSQ RG

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.