Factsheet for TraesCS3D01G251800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G280900.1	Wheat	cytosol	95.94	98.84
TraesCS3A01G251400.1	Wheat	cytosol	95.71	98.38
HORVU3Hr1G066840.2	Barley	cytosol	86.23	89.67
EES03502	Sorghum	mitochondrion	76.07	77.12
Os01t0708700-01	Rice	cytosol	74.72	75.06
Zm00001d043691_P001	Maize	mitochondrion	72.46	73.12
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	53.05	52.11
CDX72935	Canola	cytosol	25.51	42.97
TraesCS3D01G107700.1	Wheat	cytosol	41.53	42.3
Solyc03g121760.2.1	Tomato	cytosol	40.18	41.49
PGSC0003DMT400006376	Potato	cytosol	39.73	41.22
Bra025971.1-P	Field mustard	nucleus	32.96	38.93
CDY26241	Canola	nucleus	32.96	38.93
AT1G72670.1	Thale cress	cytosol	36.12	38.65
CDY48305	Canola	nucleus	32.51	38.4
Bra016042.1-P	Field mustard	cytosol	35.44	38.11
KRH10035	Soybean	cytosol	35.44	37.74
AT1G17480.1	Thale cress	cytosol	31.6	37.74
KRH23285	Soybean	nucleus	34.54	37.14
KRH44124	Soybean	mitochondrion	34.99	36.82
KRH47099	Soybean	cytosol	36.34	34.92
TraesCS5D01G037300.2	Wheat	nucleus	25.06	25.81
TraesCS7D01G107600.2	Wheat	nucleus	18.74	25.38
TraesCS5D01G382500.1	Wheat	nucleus	23.7	23.97
TraesCS1D01G064700.1	Wheat	cytosol	25.51	23.64
TraesCS3D01G346500.1	Wheat	cytosol	25.96	23.05
TraesCS3D01G543500.1	Wheat	cytosol	23.7	21.17
TraesCS1D01G287100.2	Wheat	cytosol	22.57	18.9
TraesCS3D01G392900.1	Wheat	cytosol	21.22	15.11

Protein Annotations

EnsemblPlants:TraesCS3D01G251800.2	EnsemblPlantsGene:TraesCS3D01G251800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
SMART:SM00015	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:352612954..352615078

Molecular Weight (calculated)

48526.0 Da

IEP (calculated)

11.323

GRAVY (calculated)

-0.728

Length

443 amino acids

Sequence
(BLAST)

001: MGASGKWIKT LVGLKPAAAE KERHAGGKGR KWSRLWRSSS GGQRAAASAA ASEVSETSSA AADALSSVVA AVVRAPPKDF RVIRQEWAAV RIQTAFRGFL
101: ARRALRALRG IVRLQALVRG RRVRKQLAVT VKCMQALVRV QARARDRRTR LSADGRDSQD TLDDHSSHAD PVKEAETGWC DSQGTVDDVR SKIHMRREGA
201: IKRERAIAYA LSHQVHPARI VWAYKQRNSN HNGRPSSPAV SLKNHGTNRS NQWSYLDGWM ATKPWESRLM EQSHSEQTNS RCSESIDEMN EVSSKLSEAS
301: SVKIRRNNVT TRVSAKPPSV IAVCDESAPS TSSVTQMTGN HFTTSERRSD CGQGGAPSYM GLTKSAKARL SGSSSTHKPP LQRQGSADKH NYSRGAFSSI
401: DVQSTAGSEV SVTSKRLNGL TLKGRGTRRS MDKENDDQSN SFF

Best Arabidopsis Sequence Match ( AT1G17480.1 )
(BLAST)

001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S

Arabidopsis Description

IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.