CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10035	Soybean	cytosol	93.2	92.31
KRH44124	Soybean	mitochondrion	60.44	59.14
KRH47099	Soybean	cytosol	62.86	56.18
CDX72935	Canola	cytosol	30.83	48.29
KRH05433	Soybean	cytosol	44.9	44.79
KRH15576	Soybean	cytosol	45.15	44.6
Bra025971.1-P	Field mustard	nucleus	38.84	42.67
CDY26241	Canola	nucleus	38.84	42.67
AT1G17480.1	Thale cress	cytosol	38.35	42.59
AT1G72670.1	Thale cress	cytosol	42.72	42.51
CDY48305	Canola	nucleus	38.59	42.4
KRH61522	Soybean	cytosol	45.63	41.78
KRH52206	Soybean	cytosol	45.63	41.78
Bra016042.1-P	Field mustard	cytosol	41.75	41.75
PGSC0003DMT400006376	Potato	cytosol	43.2	41.69
Solyc03g121760.2.1	Tomato	cytosol	42.96	41.26
Os01t0708700-01	Rice	cytosol	38.35	35.83
TraesCS3B01G280900.1	Wheat	cytosol	37.14	35.58
TraesCS3A01G251400.1	Wheat	cytosol	37.14	35.5
Zm00001d038861_P001	Maize	cytosol, plastid	36.41	34.97
EES03502	Sorghum	mitochondrion	36.89	34.78
TraesCS3D01G251800.2	Wheat	cytosol	37.14	34.54
Zm00001d043691_P001	Maize	mitochondrion	36.41	34.17
Os05t0541100-01	Rice	plastid	33.5	33.82
HORVU3Hr1G066840.2	Barley	cytosol	33.25	32.16
TraesCS1B01G379600.1	Wheat	mitochondrion	32.04	31.73
TraesCS1A01G362400.1	Wheat	mitochondrion	30.58	30.81
KRH22612	Soybean	cytosol	30.83	29.88
KRH26707	Soybean	cytosol	29.61	28.91
KRH39086	Soybean	cytosol	30.1	28.57
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	31.07	28.38
KXG22437	Sorghum	mitochondrion, plastid	37.14	28.02
HORVU1Hr1G079590.12	Barley	cytosol	30.34	26.71
KRH50151	Soybean	cytosol	17.72	25.17
KRH27315	Soybean	cytosol	17.96	25.17
KRH32840	Soybean	mitochondrion, nucleus	8.01	25.0
KRH21320	Soybean	cytosol	17.72	24.41
KRH10977	Soybean	cytosol	17.72	23.7
KRH55128	Soybean	mitochondrion, nucleus	16.99	23.65
KRH20344	Soybean	cytosol	16.99	23.57
KRH57858	Soybean	cytosol	24.76	22.47
KRH19825	Soybean	cytosol	25.49	22.34
KRH32420	Soybean	cytosol	25.24	21.94
KRG95941	Soybean	nucleus	25.24	21.8
KRH67648	Soybean	nucleus	25.0	21.59
KRH04761	Soybean	cytosol	25.24	21.53
KRH22000	Soybean	plastid	17.72	21.28
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	23.3	20.96
KRH64435	Soybean	nucleus	23.54	20.95
KRH53505	Soybean	cytosol	22.57	20.85
KRH34906	Soybean	cytosol	22.57	19.25
KRG91856	Soybean	cytosol	22.33	18.81
KRH37691	Soybean	mitochondrion	8.25	18.78
KRH06386	Soybean	mitochondrion, nucleus	23.79	17.82
KRH47821	Soybean	nucleus	23.54	17.77
KRH50198	Soybean	cytosol	20.15	15.57
KRH71267	Soybean	cytosol	20.15	15.51

Protein Annotations

EMBL:ACUP02008460	EnsemblPlants:KRH23285	EnsemblPlantsGene:GLYMA_13G348400	EntrezGene:100816492	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PFAM:PF00612	PFscan:PS50096
ProteinID:KRH23282.1	ProteinID:KRH23283.1	ProteinID:KRH23284.1	ProteinID:KRH23285	ProteinID:KRH23285.1	ProteinID:KRH23286.1
SEG:seg	SMART:SM00015	UniParc:UPI000233B09A	UniProt:K7M3M4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr13:-:43862675..43865821

Molecular Weight (calculated)

45826.8 Da

IEP (calculated)

10.937

GRAVY (calculated)

-0.602

Length

412 amino acids

Sequence
(BLAST)

001: MGASGRWFKS LLPFRKTSTD QEKGGDNKSK KKRKLWRASS EGSMKNVGGG GAAAASDSSL TYAVAVMVPK DFKLIKQEWA AIRIQAVFRA FLARRALRAL
101: RAVVRLQAIF RGRLVRKQAA VTLRCMQALV RVQARVRARN VRNSPEGKAV QKLLDEHHNH ADPFNLIEQG WCDIPGTMDE VKAKLRMRQE GAIKRDRAMA
201: YSLSTQSRLC ASPNPKATKA LTPVKHNNPS NKSLGYSLLE RWMEAKPWES PISRKSEDLV PAFQSRRNGM TTRISVKPII TSQSTSPSSA MSSEYMCDDN
301: SPVSTSYTSG SLSLPSTNTV LVEATEERDV HQPSYMNLTE STKAKLKACR SSSQNSKRLV MEDTVSHNHS TTTGLMNGDT RSSFDSDPSV NLWKDSCATP
401: LRASYQKRQI RI

Best Arabidopsis Sequence Match ( AT1G17480.1 )
(BLAST)

001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S

Arabidopsis Description

IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.