Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | KRG93305 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRH56614 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32420 | Soybean | cytosol | 92.98 | 92.19 |
| KRG95941 | Soybean | nucleus | 73.4 | 72.33 |
| KRH67648 | Soybean | nucleus | 72.13 | 71.07 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 61.28 | 60.13 |
| PGSC0003DMT400004433 | Potato | cytosol | 60.85 | 59.58 |
| Solyc09g007410.2.1 | Tomato | cytosol | 60.64 | 59.01 |
| Solyc10g084280.1.1 | Tomato | nucleus | 57.66 | 56.69 |
| PGSC0003DMT400027139 | Potato | cytosol | 57.87 | 56.55 |
| PGSC0003DMT400045333 | Potato | cytosol | 55.74 | 55.63 |
| Solyc10g086060.1.1 | Tomato | cytosol | 55.11 | 54.99 |
| CDY11238 | Canola | cytosol, plastid | 46.81 | 53.27 |
| KRH57858 | Soybean | cytosol | 50.64 | 52.42 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 52.22 |
| CDX80849 | Canola | cytosol, plastid | 47.23 | 52.11 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 52.77 | 51.88 |
| Os05t0123200-01 | Rice | plasma membrane | 51.7 | 51.27 |
| CDY55696 | Canola | nucleus, plastid | 47.66 | 51.26 |
| KXG21175 | Sorghum | cytosol | 51.49 | 51.16 |
| CDY04876 | Canola | nucleus, plastid | 48.3 | 51.01 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 48.09 | 50.79 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 49.36 | 50.33 |
| Zm00001d035492_P009 | Maize | cytosol | 50.85 | 50.21 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 51.06 | 49.59 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 50.64 | 49.58 |
| Zm00001d010975_P003 | Maize | cytosol | 50.43 | 49.58 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 50.43 | 49.38 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 50.0 | 49.16 |
| KRH04761 | Soybean | cytosol | 50.21 | 48.86 |
| CDY10410 | Canola | cytosol, plastid | 45.53 | 48.2 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 47.66 | 48.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 46.6 | 47.71 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 46.17 | 45.97 |
| Bra009554.1-P | Field mustard | cytosol | 44.68 | 44.59 |
| CDX70333 | Canola | cytosol | 45.53 | 44.58 |
| GSMUA_Achr10P... | Banana | cytosol | 39.79 | 44.31 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 46.17 | 43.49 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 46.17 | 43.49 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 46.17 | 43.49 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 46.17 | 43.49 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 45.74 | 43.35 |
| GSMUA_Achr11P... | Banana | mitochondrion | 42.55 | 43.29 |
| AT3G09710.2 | Thale cress | nucleus | 42.98 | 43.16 |
| Os01t0833800-01 | Rice | plasma membrane | 45.53 | 42.8 |
| KRH34906 | Soybean | cytosol | 42.34 | 41.2 |
| KXG33651 | Sorghum | cytosol | 43.62 | 41.16 |
| KRG91856 | Soybean | cytosol | 42.77 | 41.1 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 45.74 | 40.87 |
| Bra034081.1-P | Field mustard | nucleus | 38.51 | 40.77 |
| Zm00001d042973_P007 | Maize | cytosol | 43.83 | 40.63 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 44.68 | 39.55 |
| Bra001299.1-P | Field mustard | nucleus | 38.72 | 38.48 |
| CDX73992 | Canola | nucleus | 37.45 | 36.9 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 45.32 | 36.47 |
| CDY07937 | Canola | nucleus | 36.6 | 35.98 |
| CDY22198 | Canola | cytosol | 40.0 | 33.63 |
| CDY41307 | Canola | cytosol | 38.94 | 33.46 |
| KRH50151 | Soybean | cytosol | 20.64 | 33.45 |
| KRH20344 | Soybean | cytosol | 20.85 | 33.0 |
| KRH21320 | Soybean | cytosol | 20.43 | 32.11 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 35.11 | 31.19 |
| KRH10977 | Soybean | cytosol | 20.43 | 31.17 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 34.47 | 31.09 |
| Os05t0463300-00 | Rice | plasma membrane | 32.98 | 30.88 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 33.62 | 30.74 |
| KRH32840 | Soybean | mitochondrion, nucleus | 8.51 | 30.3 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 33.62 | 29.92 |
| KRH27315 | Soybean | cytosol | 18.51 | 29.59 |
| KRH05433 | Soybean | cytosol | 25.96 | 29.54 |
| KRH15576 | Soybean | cytosol | 26.17 | 29.5 |
| OQU78148 | Sorghum | cytosol | 34.89 | 29.29 |
| KRH26707 | Soybean | cytosol | 26.17 | 29.15 |
| KRH55128 | Soybean | mitochondrion, nucleus | 18.3 | 29.05 |
| KRH22612 | Soybean | cytosol | 25.96 | 28.71 |
| KRH39086 | Soybean | cytosol | 25.74 | 27.88 |
| KRH50198 | Soybean | cytosol | 31.28 | 27.58 |
| KRH53505 | Soybean | cytosol | 25.96 | 27.35 |
| KRH64435 | Soybean | nucleus | 26.81 | 27.21 |
| KRH71267 | Soybean | cytosol | 30.85 | 27.1 |
| KRH61522 | Soybean | cytosol | 25.74 | 26.89 |
| KRH52206 | Soybean | cytosol | 25.74 | 26.89 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 25.96 | 26.64 |
| KRH22000 | Soybean | plastid | 18.94 | 25.95 |
| KRH23285 | Soybean | nucleus | 22.34 | 25.49 |
| KRH10035 | Soybean | cytosol | 22.34 | 25.24 |
| KRH47821 | Soybean | nucleus | 29.15 | 25.09 |
| KRH06386 | Soybean | mitochondrion, nucleus | 29.36 | 25.09 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.19 | 24.0 |
| KRH37691 | Soybean | mitochondrion | 9.15 | 23.76 |
| KRH44124 | Soybean | mitochondrion | 20.0 | 22.33 |
| KRH47099 | Soybean | cytosol | 20.85 | 21.26 |
Protein Annotations
| EntrezGene:100799058 | MapMan:35.1 | EMBL:ACUP02008209 | ncoils:Coil | InterPro:DUF4005 | EnsemblPlantsGene:GLYMA_13G137500 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | UniProt:K7LZM0 |
| EnsemblPlants:KRH19825 | ProteinID:KRH19825 | ProteinID:KRH19825.1 | ProteinID:KRH19826.1 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | SMART:SM00015 | UniParc:UPI000233CD6F | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:25026779..25030813
Molecular Weight (calculated)
52302.9 Da
IEP (calculated)
10.799
GRAVY (calculated)
-0.796
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRGSSWFS TVKKALSPEP KEKNDQNSSR SKKKWFGKQK LQTSESTSQT DNAPPLPPPE IILTHVESEI SHERIEVATA VDAVEPVPAV QMAAAEVQAT
101: TTVQFNSKPT EEVAAIRIQK AFRGYLARRE LRALRGLVRL RSLMEGPVVK RQAISTLRSM QTFAHLQTQI RSRRLRMLEE NQELQKQLLQ KHAKELESIR
201: LGEEWDDSIQ SKEQVEAKLL SKYEAAMRRE RAMAYSFSHQ QNWKNASRSV NPMFMDPTNP AWGWSWLERW MAARPWESHS LMEKEKNDNK SLRSSSRGIT
301: SAEISKSFAK FQLNSEKHSP TASQNPGSPN FESHSNPPKP SSPAVARKLK KASPKDILAI DDGTKSMVSV QSERPRRHSI AGSIVGDDES LASSPSIPSY
401: MVPTKSAKAK SRMQSPFAAE NGTPDKGSSG TAKKRLSFPA SPARPRRHSG PPKVESSFNA EITVGNGVAG
101: TTVQFNSKPT EEVAAIRIQK AFRGYLARRE LRALRGLVRL RSLMEGPVVK RQAISTLRSM QTFAHLQTQI RSRRLRMLEE NQELQKQLLQ KHAKELESIR
201: LGEEWDDSIQ SKEQVEAKLL SKYEAAMRRE RAMAYSFSHQ QNWKNASRSV NPMFMDPTNP AWGWSWLERW MAARPWESHS LMEKEKNDNK SLRSSSRGIT
301: SAEISKSFAK FQLNSEKHSP TASQNPGSPN FESHSNPPKP SSPAVARKLK KASPKDILAI DDGTKSMVSV QSERPRRHSI AGSIVGDDES LASSPSIPSY
401: MVPTKSAKAK SRMQSPFAAE NGTPDKGSSG TAKKRLSFPA SPARPRRHSG PPKVESSFNA EITVGNGVAG
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.