CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61522	Soybean	cytosol	92.67	92.67
KRH05433	Soybean	cytosol	68.44	74.58
KRH15576	Soybean	cytosol	67.56	72.9
VIT_04s0008g01080.t01	Wine grape	nucleus	69.33	69.49
Solyc08g062940.2.1	Tomato	cytosol	46.22	67.31
PGSC0003DMT400021183	Potato	cytosol	64.22	66.59
AT2G26180.1	Thale cress	cytosol	56.67	61.3
Bra034294.1-P	Field mustard	nucleus	52.89	59.95
CDX77034	Canola	cytosol	52.67	59.85
CDY35313	Canola	nucleus	52.67	59.7
GSMUA_Achr6P04930_001	Banana	cytosol	49.56	54.93
Os01t0194200-01	Rice	cytosol	52.67	53.62
TraesCS3B01G124000.1	Wheat	cytosol	51.56	53.46
TraesCS3D01G107700.1	Wheat	cytosol	51.56	53.33
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	51.78	53.2
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	48.0	52.43
OQU86150	Sorghum	cytosol	51.11	51.8
GSMUA_Achr2P16650_001	Banana	nucleus	48.67	51.65
GSMUA_Achr10P...	Banana	cytosol	47.56	50.59
Zm00001d039471_P001	Maize	cytosol	50.44	50.44
GSMUA_Achr2P15730_001	Banana	cytosol	47.33	48.3
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	51.11	46.46
KRH10035	Soybean	cytosol	42.44	45.91
KRH23285	Soybean	nucleus	41.78	45.63
KRH44124	Soybean	mitochondrion	42.0	44.89
KRH47099	Soybean	cytosol	42.89	41.87
KRH22612	Soybean	cytosol	32.22	34.12
KRH26707	Soybean	cytosol	31.33	33.41
KRH39086	Soybean	cytosol	32.22	33.41
KRH21320	Soybean	cytosol	20.67	31.1
KRH10977	Soybean	cytosol	20.67	30.19
KRH50151	Soybean	cytosol	18.22	28.28
KRH55128	Soybean	mitochondrion, nucleus	18.44	28.04
KRH27315	Soybean	cytosol	18.22	27.89
KRH20344	Soybean	cytosol	17.56	26.6
KRH32840	Soybean	mitochondrion, nucleus	7.78	26.52
KRG95941	Soybean	nucleus	27.56	26.0
KRH64435	Soybean	nucleus	26.67	25.92
KRH19825	Soybean	cytosol	26.89	25.74
KRH53505	Soybean	cytosol	25.33	25.56
KRH57858	Soybean	cytosol	25.78	25.55
KRH67648	Soybean	nucleus	26.89	25.37
KRH32420	Soybean	cytosol	26.44	25.11
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	25.33	24.89
KRH04761	Soybean	cytosol	26.44	24.64
KRH34906	Soybean	cytosol	25.11	23.4
KRH22000	Soybean	plastid	17.78	23.32
KRG91856	Soybean	cytosol	24.44	22.49
KRH47821	Soybean	nucleus	26.89	22.16
KRH06386	Soybean	mitochondrion, nucleus	26.89	22.0
KRH37691	Soybean	mitochondrion	7.78	19.34
KRH71267	Soybean	cytosol	21.11	17.76
KRH50198	Soybean	cytosol	20.67	17.45

Protein Annotations

EMBL:ACUP02003411	EnsemblPlants:KRH52206	EnsemblPlantsGene:GLYMA_06G052800	EntrezGene:100782825	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86
PFscan:PS50096	ProteinID:KRH52206	ProteinID:KRH52206.1	SEG:seg	UniParc:UPI00023C39E4	UniProt:I1K8D6
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:3991249..3993778

Molecular Weight (calculated)

49794.5 Da

IEP (calculated)

11.368

GRAVY (calculated)

-0.634

Length

450 amino acids

Sequence
(BLAST)

001: MMGASGKWVK ALIGLKKPDK EEHVKEGGGK SKKWRLWRSS SGDTGVSWKG FKGGNHSAVA SSEVGSDSSP HVVAAAAATG AAFTAAVATV VRAPPKDFRL
101: VKQEWAAIRI QTAFRALLAR RALRALKGVV RIQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMS IEGQTVQNLL NERRSKLDLL KQAEEGWCDS
201: RGTLEDVKTK IQMRQEGAFK RERAMAYSLA HKQCRSTPSP NPRTRASFTS LKSHEMNKAN CGWSWLERWM AAKPWESRLM EQSQSQAEAL DKTPPPKKFV
301: ESFVSSNSKQ SMVKVKKNNV TTRISARPPL VGQATRSSSS PSSEFRYDES SASSSICTST TPMSGNTCDR TEDSNGNAVV ARPNYMNLTQ STKAKQKTSG
401: NHVYNRAQRQ QSMDGFQFLK RAAVFSTADS DPSINFSRPL HLDKSSVMAR

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.