Factsheet for TraesCS3B01G124000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G107700.1	Wheat	cytosol	98.62	98.39
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	97.47	96.58
Os01t0194200-01	Rice	cytosol	85.02	83.48
OQU86150	Sorghum	cytosol	84.56	82.66
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	94.24	82.63
Zm00001d039471_P001	Maize	cytosol	83.18	80.22
Solyc08g062940.2.1	Tomato	cytosol	44.47	62.46
GSMUA_Achr6P04930_001	Banana	cytosol	57.14	61.08
GSMUA_Achr2P16650_001	Banana	nucleus	58.99	60.38
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	55.07	58.01
VIT_04s0008g01080.t01	Wine grape	nucleus	57.6	55.68
GSMUA_Achr10P...	Banana	cytosol	53.0	54.37
PGSC0003DMT400021183	Potato	cytosol	53.69	53.69
KRH61522	Soybean	cytosol	55.3	53.33
Bra034294.1-P	Field mustard	nucleus	47.93	52.39
CDY35313	Canola	nucleus	47.93	52.39
KRH15576	Soybean	cytosol	50.23	52.28
AT2G26180.1	Thale cress	cytosol	50.0	52.16
CDX77034	Canola	cytosol	47.23	51.77
KRH52206	Soybean	cytosol	53.46	51.56
KRH05433	Soybean	cytosol	48.62	51.09
GSMUA_Achr2P15730_001	Banana	cytosol	48.16	47.39
TraesCS3B01G280900.1	Wheat	cytosol	42.4	42.79
TraesCS1B01G379600.1	Wheat	mitochondrion	36.18	37.74
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	29.95	30.23
TraesCS5B01G028200.1	Wheat	nucleus	29.03	28.44
TraesCS5B01G375000.1	Wheat	nucleus	27.42	27.29
TraesCS1B01G082100.1	Wheat	cytosol	28.57	25.83
TraesCS7B01G010100.1	Wheat	nucleus	19.12	25.38
TraesCS3B01G385100.1	Wheat	cytosol	27.88	24.25
TraesCS7B01G218800.3	Wheat	nucleus	27.65	22.02
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	25.81	21.29
TraesCS1B01G297500.1	Wheat	cytosol	21.43	17.61
TraesCS3B01G431200.1	Wheat	cytosol	20.97	14.54

Protein Annotations

EnsemblPlants:TraesCS3B01G124000.1	EnsemblPlantsGene:TraesCS3B01G124000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF88	PFAM:PF00612	PFscan:PS50096	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:+:97076244..97078787

Molecular Weight (calculated)

47647.9 Da

IEP (calculated)

11.254

GRAVY (calculated)

-0.650

Length

434 amino acids

Sequence
(BLAST)

001: MGGSGKWVKS LIGLKKPDRE DCKNKLQDPS VLGGGGKGRK WKLWRSSSGD HGSLWRGSRG GSQRSAASEA SDDASSLAAA AADMFTAALA TVARAPAKDF
101: MAVRQEWAAI RIQTAFRGFL ARRALRALKG LVRLQAIVRG RQVRKQAAVT LRCMQALVRV QARIRARRVR MSTEGQAVQK LIQARRTKLD ILREAEEGWC
201: DSQGTLEAVR VKLQKRQEGA IKRERAIAYV YHGVAKCNLQ KGSNGRSNQS GLLLKHQHCD KNNGSWSWLE RWMAARPWEN RLMEEHNQTN ASSPDLVPSK
301: NCEDAFGVLG DFSEPNSVKV RKNNVSKRIS AKPPGATHPQ RFKAQSISSL STELHNDESS ASSSSCFAST PLSFSTLLTP EKTNGSSVRS RPNYMSLTES
401: IKAKRKPCGA QRTTASKQLD DRKAPGAELK AAKA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.