Factsheet for Bra034294.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35313	Canola	nucleus	98.99	98.99
CDX77034	Canola	cytosol	96.47	96.72
AT2G26180.1	Thale cress	cytosol	85.39	81.49
Solyc08g062940.2.1	Tomato	cytosol	48.36	62.14
VIT_04s0008g01080.t01	Wine grape	nucleus	68.01	60.13
PGSC0003DMT400021183	Potato	cytosol	60.2	55.07
KRH61522	Soybean	cytosol	61.21	54.0
KRH15576	Soybean	cytosol	56.68	53.96
KRH05433	Soybean	cytosol	55.67	53.51
KRH52206	Soybean	cytosol	59.95	52.89
GSMUA_Achr6P04930_001	Banana	cytosol	49.12	48.03
Os01t0194200-01	Rice	cytosol	53.4	47.96
TraesCS3B01G124000.1	Wheat	cytosol	52.39	47.93
TraesCS3D01G107700.1	Wheat	cytosol	52.39	47.82
OQU86150	Sorghum	cytosol	53.15	47.52
GSMUA_Achr2P16650_001	Banana	nucleus	50.13	46.93
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	51.64	46.8
Zm00001d039471_P001	Maize	cytosol	52.39	46.22
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	46.1	44.42
GSMUA_Achr10P...	Banana	cytosol	46.6	43.74
Bra016042.1-P	Field mustard	cytosol	43.58	41.99
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	51.64	41.41
GSMUA_Achr2P15730_001	Banana	cytosol	44.33	39.91
Bra025971.1-P	Field mustard	nucleus	37.28	39.47
Bra005462.1-P	Field mustard	cytosol, plastid	22.67	33.96
Bra031331.1-P	Field mustard	cytosol	32.75	33.85
Bra021888.1-P	Field mustard	plastid	21.16	32.43
Bra021588.1-P	Field mustard	cytosol, plastid	21.16	31.82
Bra001855.1-P	Field mustard	cytosol	25.94	30.03
Bra023846.1-P	Field mustard	cytosol	28.72	27.34
Bra028854.1-P	Field mustard	nucleus, plastid	28.46	25.39
Bra017988.1-P	Field mustard	nucleus	21.91	24.86
Bra033443.1-P	Field mustard	cytosol	27.2	24.27
Bra000717.1-P	Field mustard	nucleus	25.44	23.38
Bra009554.1-P	Field mustard	cytosol	27.2	22.93
Bra017997.1-P	Field mustard	nucleus, plastid	26.7	22.32
Bra019589.1-P	Field mustard	nucleus	26.2	21.89
Bra000930.1-P	Field mustard	mitochondrion, nucleus	27.96	21.14
Bra033284.1-P	Field mustard	nucleus	27.96	21.1
Bra034081.1-P	Field mustard	nucleus	22.67	20.27
Bra001299.1-P	Field mustard	nucleus	21.66	18.18
Bra007471.1-P	Field mustard	nucleus	21.91	17.54
Bra037689.1-P	Field mustard	cytosol	21.41	16.13
Bra000318.1-P	Field mustard	nucleus	22.67	15.13
Bra004776.1-P	Field mustard	nucleus	21.41	13.6

Protein Annotations

EnsemblPlants:Bra034294.1	EnsemblPlants:Bra034294.1-P	EnsemblPlantsGene:Bra034294	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86	PFAM:PF00612	PFscan:PS50096	SEG:seg
SMART:SM00015	UniParc:UPI00025452AF	UniProt:M4EZQ1	MapMan:35.1	:	:

Description

AT2G26180 (E=8e-135) IQD6 | IQD6 (IQ-domain 6); calmodulin binding

Coordinates

chrA04:-:11706746..11708295

Molecular Weight (calculated)

44586.3 Da

IEP (calculated)

11.437

GRAVY (calculated)

-0.720

Length

397 amino acids

Sequence
(BLAST)

001: MGASGKWVKS IMGLKKPEKS ESEKGSSGKN KKWKLWRSPS GDLASSWKGI RHGRSDSVSY SAAVATVLRA PPKDFKAVRE EWAAIRIQTA FRGFLARRAL
101: RALKGIVRLQ ALVRGRQVRK QAAVTLRCMQ ALVRVQARVR ARRVRMTVQG QAVQKLLDEH RSKSDLLKEV EEGWCDRKGT VDDIKTKLQQ RQDGAFKRER
201: ALAYALAQKQ WRSIPSSNLK TNSSISYLKS QEFDKNSWGW SWLERWMAAR PWETRLMDAT EVATPPTKHL KSPEVVKVRR NNVTTRVSAK PPPHMSSSSS
301: GYDFNVSPGS TTPASVTTGL VSDNSSKNKP SYMSMTESTK AKRRTNHVMR QSMDEFQFMN NSGLFTGDLK SSSPVSSDPP SYVTNFSKPF GVSTRRG

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.