Factsheet for Bra001855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92933	Canola	cytosol, plastid	91.84	78.55
CDY24286	Canola	cytosol	90.96	77.23
CDX92931	Canola	mitochondrion, nucleus	55.1	74.12
AT3G22190.2	Thale cress	cytosol	83.09	67.54
Bra031331.1-P	Field mustard	cytosol	75.22	67.19
Bra023846.1-P	Field mustard	cytosol	72.01	59.23
CDY24282	Canola	mitochondrion	47.23	53.11
VIT_06s0009g00210.t01	Wine grape	cytosol	55.1	42.47
Solyc11g071840.1.1	Tomato	cytosol	52.19	39.96
KRH26707	Soybean	cytosol	48.98	39.81
KRH22612	Soybean	cytosol	48.4	39.06
KRH39086	Soybean	cytosol	48.4	38.25
GSMUA_Achr4P31410_001	Banana	cytosol	48.1	37.5
GSMUA_Achr5P02600_001	Banana	cytosol	46.06	35.99
Os03t0787200-01	Rice	cytosol	43.73	35.55
GSMUA_Achr4P22800_001	Banana	cytosol	44.9	35.48
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	42.57	33.95
Zm00001d034366_P003	Maize	mitochondrion	44.02	33.78
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	42.27	33.72
EER90769	Sorghum	mitochondrion	43.15	33.64
TraesCS5D01G037300.2	Wheat	nucleus	41.69	33.26
HORVU5Hr1G007780.1	Barley	cytosol	41.4	33.1
Os12t0619000-01	Rice	cytosol	42.57	33.03
TraesCS5A01G029600.3	Wheat	nucleus	41.69	32.95
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	40.52	32.33
KXG24027	Sorghum	cytosol	41.11	32.05
TraesCS5B01G028200.1	Wheat	nucleus	40.52	31.38
Os03t0648300-01	Rice	cytosol	40.23	31.36
TraesCS5B01G375000.1	Wheat	nucleus	37.32	29.36
TraesCS5D01G382500.1	Wheat	nucleus	37.32	29.22
TraesCS5A01G373000.1	Wheat	nucleus	37.03	29.13
Zm00001d013112_P011	Maize	mitochondrion	42.57	28.97
EER91163	Sorghum	cytosol	35.57	28.91
HORVU5Hr1G092660.2	Barley	nucleus	36.73	28.77
Zm00001d031098_P004	Maize	cytosol	42.27	28.71
Zm00001d033211_P002	Maize	cytosol	35.86	28.67
Bra034294.1-P	Field mustard	nucleus	30.03	25.94
Bra005462.1-P	Field mustard	cytosol, plastid	19.24	24.91
Bra021588.1-P	Field mustard	cytosol, plastid	17.2	22.35
Bra016042.1-P	Field mustard	cytosol	26.53	22.09
Bra021888.1-P	Field mustard	plastid	16.04	21.24
Bra025971.1-P	Field mustard	nucleus	22.16	20.27
Bra033443.1-P	Field mustard	cytosol	26.24	20.22
Bra028854.1-P	Field mustard	nucleus, plastid	25.66	19.78
Bra017988.1-P	Field mustard	nucleus	19.53	19.14
Bra033284.1-P	Field mustard	nucleus	29.15	19.01
Bra019589.1-P	Field mustard	nucleus	25.07	18.11
Bra000717.1-P	Field mustard	nucleus	22.74	18.06
Bra017997.1-P	Field mustard	nucleus, plastid	24.49	17.68
Bra009554.1-P	Field mustard	cytosol	23.91	17.41
Bra000930.1-P	Field mustard	mitochondrion, nucleus	26.53	17.33
Bra034081.1-P	Field mustard	nucleus	19.83	15.32
Bra007471.1-P	Field mustard	nucleus	21.28	14.72
Bra001299.1-P	Field mustard	nucleus	18.66	13.53
Bra037689.1-P	Field mustard	cytosol	18.95	12.33
Bra000318.1-P	Field mustard	nucleus	19.83	11.43
Bra004776.1-P	Field mustard	nucleus	19.53	10.72

Protein Annotations

EnsemblPlants:Bra001855.1	EnsemblPlants:Bra001855.1-P	EnsemblPlantsGene:Bra001855	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF12	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI00025406BA	UniProt:M4CCC5	MapMan:35.2	:

Description

AT3G22190 (E=1e-061) IQD5 | IQD5 (IQ-domain 5); calmodulin binding

Coordinates

chrA03:-:18925150..18926869

Molecular Weight (calculated)

38145.2 Da

IEP (calculated)

11.586

GRAVY (calculated)

-0.713

Length

343 amino acids

Sequence
(BLAST)

001: MKVKIATKSR FGRKHSVDFD ADKFQVGFED SNVHSVIDAG VSTSSSLQSY GAAYEEQRKE HLAATRIQTA FRAFLARRAL RALKGLVRLQ ALVRGHVVRK
101: QAAVTLRCMQ ALVRVQARVR ARRVRLSLEC ETGQQTLQQQ VTDEARVQEI EWQAGTRKLS AHSAFQPDKN NWGWNWLERW MAVRPWENRF LDSSNLREDV
201: NLNNMEQSES VHKTQMKSAS RMPNTSTLVS GGVSSGKATG PSMSDNDSSS PGVSSSIPVV SKARSKLAKD DLAVEVNSRR PGAVPRSHSN PKERSSKERL
301: SLPNSGKSLG SQSAKAIRAG KLTQTSAQNQ RRRNSDPIRQ RLA

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.