Factsheet for GSMUA_Achr4P22800_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02600_001	Banana	cytosol	71.43	70.61
GSMUA_Achr4P31410_001	Banana	cytosol	70.28	69.32
VIT_06s0009g00210.t01	Wine grape	cytosol	54.61	53.26
Bra031331.1-P	Field mustard	cytosol	45.39	51.3
CDY37387	Canola	cytosol	45.16	51.04
KRH22612	Soybean	cytosol	49.77	50.82
KRH26707	Soybean	cytosol	49.08	50.47
Os03t0787200-01	Rice	cytosol	48.62	50.0
CDY10618	Canola	cytosol	46.08	49.26
Solyc11g071840.1.1	Tomato	cytosol	50.46	48.88
AT3G22190.2	Thale cress	cytosol	47.47	48.82
KRH39086	Soybean	cytosol	47.93	47.93
CDX92933	Canola	cytosol, plastid	44.24	47.88
CDY24286	Canola	cytosol	44.47	47.77
Os12t0619000-01	Rice	cytosol	48.39	47.51
KXG24027	Sorghum	cytosol	46.77	46.14
EER90769	Sorghum	mitochondrion	46.08	45.45
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	44.93	45.35
HORVU5Hr1G007780.1	Barley	cytosol	44.7	45.22
Bra001855.1-P	Field mustard	cytosol	35.48	44.9
TraesCS5A01G029600.3	Wheat	nucleus	44.7	44.7
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	44.24	44.65
TraesCS5D01G037300.2	Wheat	nucleus	44.24	44.65
CDY39505	Canola	cytosol	39.86	43.8
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	43.32	43.72
Zm00001d034366_P003	Maize	mitochondrion	44.93	43.62
TraesCS5B01G028200.1	Wheat	nucleus	44.47	43.57
CDX92931	Canola	mitochondrion, nucleus	25.58	43.53
Os03t0648300-01	Rice	cytosol	44.01	43.41
EER91163	Sorghum	cytosol	41.94	43.13
Zm00001d033211_P002	Maize	cytosol	41.94	42.42
Bra023846.1-P	Field mustard	cytosol	39.86	41.49
HORVU5Hr1G092660.2	Barley	nucleus	41.47	41.1
TraesCS5B01G375000.1	Wheat	nucleus	41.24	41.05
TraesCS5D01G382500.1	Wheat	nucleus	41.24	40.87
TraesCS5A01G373000.1	Wheat	nucleus	41.01	40.83
CDY58749	Canola	cytosol	42.86	40.79
Zm00001d031098_P004	Maize	cytosol	46.54	40.0
Zm00001d013112_P011	Maize	mitochondrion	43.78	37.7
CDY24282	Canola	mitochondrion	26.27	37.38
GSMUA_Achr6P02050_001	Banana	cytosol	12.9	36.13
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	30.88	32.52
GSMUA_Achr6P04930_001	Banana	cytosol	29.49	31.53
GSMUA_Achr10P...	Banana	cytosol	30.65	31.44
GSMUA_Achr2P16650_001	Banana	nucleus	30.65	31.37
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	21.43	30.29
GSMUA_Achr2P20050_001	Banana	nucleus	19.59	28.72
GSMUA_Achr10P...	Banana	nucleus	28.57	27.56
GSMUA_Achr3P17820_001	Banana	cytosol	29.95	27.2
GSMUA_Achr2P15730_001	Banana	cytosol	27.42	26.98
GSMUA_Achr7P18240_001	Banana	cytosol	27.19	25.0
GSMUA_Achr7P22680_001	Banana	cytosol	26.73	24.95
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	26.27	24.73
GSMUA_Achr6P14440_001	Banana	nucleus	9.68	24.56
GSMUA_Achr1P18950_001	Banana	nucleus	25.81	24.45
GSMUA_Achr1P16160_001	Banana	nucleus	24.65	23.88
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	25.12	23.75
GSMUA_Achr10P...	Banana	cytosol	23.04	23.7
GSMUA_Achr10P...	Banana	cytosol	21.66	20.8
GSMUA_Achr11P...	Banana	mitochondrion	21.66	20.35
GSMUA_Achr7P02870_001	Banana	mitochondrion	12.9	18.6
GSMUA_Achr8P32220_001	Banana	cytosol	17.05	16.93

Protein Annotations

EnsemblPlants:GSMUA_Achr4P22800_001	EnsemblPlants:GSMUA_Achr4T22800_001	EnsemblPlantsGene:GSMUA_Achr4G22800_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF12	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI000294B5B8	UniProt:M0SR92	MapMan:35.2	:

Description

Putative IQ calmodulin-binding motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G22800_001]

Coordinates

chr4:+:23081770..23089300

Molecular Weight (calculated)

47752.4 Da

IEP (calculated)

10.710

GRAVY (calculated)

-0.643

Length

434 amino acids

Sequence
(BLAST)

001: MGISAKWLRS LVGIRKHEKL QHPENDKYEQ GASCLTSASA NKLNSQKENY VGLDPATTED ELALGSALST GDANLQSNSD SASSPTAQMT SQTQQNMREE
101: WAATVIQTAF RAFLARRALR ALKGLVRLQA LVRGHAVRKQ AAITLRCMQA LVRVQARVRA RRVRLALESQ LGGQTVQEQQ SHEEARTREI EEGWCDSVGS
201: VEEIQAKLLR RQEAAAKRER AMAYAVTHQW QAGLRKPAAS AGFEPDKNNW GWNWLERWMA VRPWENRFLD ISLKDGVKIH ENGTAERKNE ISGLQTQPQT
301: QNVPSGKRPI SNLHSNIINH KSVPLVSHAS GFSSSQSANV LATSGFSSSQ PKQKPSSEEV CIETTSQTSA VGARSLSNLK DRPSPVESQV KKLSLPTSGL
401: GVGKHAANKV AINQSENRST LKARLNLKQN TMKS

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.