Factsheet for TraesCS5B01G375000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G373000.1	Wheat	nucleus	96.33	96.33
TraesCS5D01G382500.1	Wheat	nucleus	94.72	94.29
HORVU5Hr1G092660.2	Barley	nucleus	92.2	91.78
Os03t0648300-01	Rice	cytosol	72.48	71.82
EER91163	Sorghum	cytosol	66.97	69.19
Zm00001d033211_P002	Maize	cytosol	66.74	67.83
TraesCS5B01G028200.1	Wheat	nucleus	55.28	54.4
GSMUA_Achr4P31410_001	Banana	cytosol	46.56	46.14
Bra031331.1-P	Field mustard	cytosol	38.99	44.27
CDY37387	Canola	cytosol	38.76	44.01
KRH26707	Soybean	cytosol	42.43	43.84
GSMUA_Achr5P02600_001	Banana	cytosol	43.58	43.28
KRH22612	Soybean	cytosol	41.74	42.82
CDY24286	Canola	cytosol	39.68	42.82
CDX92933	Canola	cytosol, plastid	39.22	42.64
CDY10618	Canola	cytosol	39.22	42.12
GSMUA_Achr4P22800_001	Banana	cytosol	41.05	41.24
AT3G22190.2	Thale cress	cytosol	39.91	41.23
VIT_06s0009g00210.t01	Wine grape	cytosol	41.51	40.67
Solyc11g071840.1.1	Tomato	cytosol	41.28	40.18
KRH39086	Soybean	cytosol	39.91	40.09
CDY39505	Canola	cytosol	34.86	38.48
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	37.84	38.37
CDX92931	Canola	mitochondrion, nucleus	22.25	38.04
Bra001855.1-P	Field mustard	cytosol	29.36	37.32
CDY58749	Canola	cytosol	36.47	34.87
Bra023846.1-P	Field mustard	cytosol	33.26	34.77
CDY24282	Canola	mitochondrion	22.25	31.8
TraesCS3B01G124000.1	Wheat	cytosol	27.29	27.42
TraesCS7B01G010100.1	Wheat	nucleus	18.58	24.77
TraesCS3B01G280900.1	Wheat	cytosol	24.08	24.42
TraesCS1B01G379600.1	Wheat	mitochondrion	22.25	23.32
TraesCS1B01G082100.1	Wheat	cytosol	22.94	20.83
TraesCS3B01G385100.1	Wheat	cytosol	23.17	20.24
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	22.48	18.63
TraesCS7B01G218800.3	Wheat	nucleus	21.56	17.25
TraesCS1B01G297500.1	Wheat	cytosol	17.43	14.39
TraesCS3B01G431200.1	Wheat	cytosol	17.43	12.14

Protein Annotations

EnsemblPlants:TraesCS5B01G375000.1	EnsemblPlantsGene:TraesCS5B01G375000	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF31
PFAM:PF00612	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	MapMan:35.2

Description

No Description!

Coordinates

chr5B:+:552482452..552488373

Molecular Weight (calculated)

48007.3 Da

IEP (calculated)

10.321

GRAVY (calculated)

-0.855

Length

436 amino acids

Sequence
(BLAST)

001: MGISAKWIKS LVRIRKQEKG RNSETQENAQ NAESSEASSS ARQLHKRKHS VDPALEELAV PSEASTDGTN TQFGSNSISS ESASRDVHVS QTEELPREGD
101: LAATVIQSAF RAFLARRALR ALKGIVLLQA LVRGYIVRKQ TAETLQCMHE LVRAEARVRA RQAGVALENQ VARKKVPEQD DCENHVREIE EGWCGGIGSV
201: AEMQAKVLKR QEAAAKRERA MAYALTHQRQ AGLRQQKPTN LQGSELDDDH WGSNWVERWV AARPWENRLL DNNAKESMPV CDDNQDEEIK SQVTPKGKAP
301: TSSTPPNGLS KKKGASHRKS YSDINFTSFG RSSSVLPSTS LGTSKQKPKL EDEVFEEVSS QPTDIAPLAV HNQKERRGQL NTSAKKRLSL PNNVGGGAAK
401: GTTNRNPMNR SSSAKSDLKP RANAPNQARK QVELQA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.