Factsheet for Solyc11g071840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g00210.t01	Wine grape	cytosol	66.52	66.97
KRH26707	Soybean	cytosol	58.26	61.85
KRH22612	Soybean	cytosol	58.48	61.65
CDY37387	Canola	cytosol	51.12	59.64
KRH39086	Soybean	cytosol	57.59	59.45
Bra031331.1-P	Field mustard	cytosol	50.45	58.85
CDY10618	Canola	cytosol	52.46	57.88
AT3G22190.2	Thale cress	cytosol	54.02	57.35
CDY24286	Canola	cytosol	51.56	57.18
CDX92933	Canola	cytosol, plastid	51.12	57.11
GSMUA_Achr5P02600_001	Banana	cytosol	52.9	53.99
GSMUA_Achr4P31410_001	Banana	cytosol	52.46	53.41
Bra001855.1-P	Field mustard	cytosol	39.96	52.19
CDX92931	Canola	mitochondrion, nucleus	29.02	50.98
CDY39505	Canola	cytosol	44.87	50.89
GSMUA_Achr4P22800_001	Banana	cytosol	48.88	50.46
CDY58749	Canola	cytosol	48.44	47.59
Os12t0619000-01	Rice	cytosol	46.65	47.29
Os03t0787200-01	Rice	cytosol	43.75	46.45
Bra023846.1-P	Field mustard	cytosol	43.08	46.28
EER90769	Sorghum	mitochondrion	44.87	45.68
KXG24027	Sorghum	cytosol	44.87	45.68
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	42.86	44.65
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	42.63	44.42
HORVU5Hr1G007780.1	Barley	cytosol	42.19	44.06
Solyc08g062940.2.1	Tomato	cytosol	30.36	44.01
Zm00001d034366_P003	Maize	mitochondrion	43.75	43.85
Os03t0648300-01	Rice	cytosol	42.63	43.41
TraesCS5D01G037300.2	Wheat	nucleus	41.52	43.26
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	41.29	43.02
TraesCS5A01G029600.3	Wheat	nucleus	41.52	42.86
CDY24282	Canola	mitochondrion	29.02	42.62
TraesCS5B01G028200.1	Wheat	nucleus	41.74	42.21
HORVU5Hr1G092660.2	Barley	nucleus	40.4	41.32
TraesCS5B01G375000.1	Wheat	nucleus	40.18	41.28
TraesCS5A01G373000.1	Wheat	nucleus	39.96	41.05
TraesCS5D01G382500.1	Wheat	nucleus	39.96	40.87
EER91163	Sorghum	cytosol	37.95	40.28
Zm00001d031098_P004	Maize	cytosol	44.2	39.21
Zm00001d033211_P002	Maize	cytosol	37.28	38.93
Zm00001d013112_P011	Maize	mitochondrion	42.41	37.7
Solyc12g014130.1.1	Tomato	nucleus	17.86	30.65
Solyc10g008790.2.1	Tomato	cytosol	19.87	29.28
Solyc02g077260.2.1	Tomato	nucleus	19.64	29.14
Solyc04g050050.2.1	Tomato	cytosol	25.22	28.68
Solyc03g121760.2.1	Tomato	cytosol	27.23	28.44
Solyc10g084280.1.1	Tomato	nucleus	27.46	25.73
Solyc09g007410.2.1	Tomato	cytosol	27.68	25.67
Solyc10g086060.1.1	Tomato	cytosol	26.12	24.84
Solyc03g083100.2.1	Tomato	nucleus	25.67	24.52
Solyc10g005000.2.1	Tomato	nucleus	20.09	22.84
Solyc06g052010.1.1	Tomato	cytosol	19.42	21.91
Solyc08g083240.2.1	Tomato	nucleus	23.88	21.88
Solyc01g009340.2.1	Tomato	nucleus	17.63	19.6
Solyc08g014280.2.1	Tomato	cytosol	22.54	18.74
Solyc06g053450.2.1	Tomato	nucleus	19.2	14.53

Protein Annotations

EnsemblPlants:Solyc11g071840.1.1	EnsemblPlantsGene:Solyc11g071840.1	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF12	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI0002769986	UniProt:K4DAP1	MapMan:35.2	:

Description

No Description!

Coordinates

chr11:+:55190753..55196754

Molecular Weight (calculated)

49460.2 Da

IEP (calculated)

10.827

GRAVY (calculated)

-0.847

Length

448 amino acids

Sequence
(BLAST)

001: MGVSGKWIRA LVGLKKSEKS HSSEKEENKS GGTGKFWHRR KHSVEIDSNL LQKELTYNDA GAGSVEDISS TSAPFASSSP SSSHQLHHAP LVKQNMREEL
101: AAIRIQTAFR GFLARRALRA LKGLVRLQAL VRGHAVRKQA AITLRCMQAL VRVQARVRAR RVRMSLESQT EQQKVEQQLE HDARVREIEE GWCDSVGSVE
201: QIQEKLLKRQ EAAAKRERAM AYALAHQWQA GSRQQATLSG FEPDKSSWGW NWLERWMAVR PWENRFLDLN VRDGVMPNEN ESAEPVNGMK NQVKVAGKKP
301: ATTTLSNDRV GPSHSSSNSK SNEKAAASLS DGCSSSPNVS ASTQETPAAL VNKPKSKPNR EDLVEEASSK PVLGSRSHSN PKERSTPSDK QGKQRLSLPG
401: SGLAPQTARQ PSRTIKRTSS TQKPLKEKSK LNETDTKSTA TVSQQAAD

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.