Factsheet for TraesCSU01G076200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	86.98	86.98
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	86.98	86.98
Os03t0787200-01	Rice	cytosol	65.58	66.82
EER90769	Sorghum	mitochondrion	63.02	61.59
Zm00001d034366_P003	Maize	mitochondrion	61.4	59.06
Zm00001d013112_P011	Maize	mitochondrion	59.53	50.79
Bra031331.1-P	Field mustard	cytosol	42.33	47.4
GSMUA_Achr5P02600_001	Banana	cytosol	48.14	47.15
CDY37387	Canola	cytosol	42.09	47.14
GSMUA_Achr4P31410_001	Banana	cytosol	47.91	46.82
VIT_06s0009g00210.t01	Wine grape	cytosol	47.21	45.62
CDY10618	Canola	cytosol	42.79	45.32
CDY24286	Canola	cytosol	42.09	44.8
CDX92933	Canola	cytosol, plastid	41.4	44.39
KRH22612	Soybean	cytosol	43.02	43.53
KRH26707	Soybean	cytosol	42.56	43.36
GSMUA_Achr4P22800_001	Banana	cytosol	43.72	43.32
AT3G22190.2	Thale cress	cytosol	42.33	43.13
Solyc11g071840.1.1	Tomato	cytosol	43.02	41.29
CDY58749	Canola	cytosol	43.72	41.23
KRH39086	Soybean	cytosol	41.16	40.78
Bra001855.1-P	Field mustard	cytosol	32.33	40.52
CDY39505	Canola	cytosol	36.28	39.49
CDX92931	Canola	mitochondrion, nucleus	23.26	39.22
Bra023846.1-P	Field mustard	cytosol	36.28	37.41
CDY24282	Canola	mitochondrion	24.88	35.08
TraesCSU01G104800.3	Wheat	nucleus	24.19	19.08

Protein Annotations

EnsemblPlants:TraesCSU01G076200.1	EnsemblPlantsGene:TraesCSU01G076200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005886	GO:GO:0016020
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF47	PFscan:PS50096
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:68144918..68148729

Molecular Weight (calculated)

47584.2 Da

IEP (calculated)

10.378

GRAVY (calculated)

-0.769

Length

430 amino acids

Sequence
(BLAST)

001: MRWLKSLVGL RKVERQQQRR KEDGDAGPTK TDAVDQFHFQ DQHSQDHASL VGPEEFPDEN GPSEDECDTP SCSGPGFSML SVPLPQTEEE LKEIWAATII
101: QTAYRALLAR RARRALKGLV RLQALVRGHI VRKQAAITLR CMQALVRVQA RVRARRVRVA LENQMDEQQN NVEEQTDEAH VREVEDGWCD SIGSVEDIQA
201: KLLKRQEAAA KRERAMAYAL SHQWQAGSRQ QAAITASELD RNSWSWNWLE RWMAVRPWES RFLGMYAADG IAIDTGAHNA EGNATKAPYR KPVKKQVSAL
301: HSSVLIQKAR PSNSEGGGSL SNPSAGSASA KPKRKLPPKE GSDEVSSRLS GLGARSSSNP KERPGQLQPR ANKRFSLPGT DAGTEVGKRQ VNKPAVNRSP
401: KATEDSPALE GKHRRAGSVG LLLKRVELQA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.