Factsheet for TraesCS5A01G425800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	95.81	95.81
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	86.98	86.98
Os03t0787200-01	Rice	cytosol	68.37	69.67
EER90769	Sorghum	mitochondrion	66.51	65.0
Zm00001d034366_P003	Maize	mitochondrion	64.65	62.19
Zm00001d013112_P011	Maize	mitochondrion	62.09	52.98
GSMUA_Achr4P31410_001	Banana	cytosol	49.3	48.18
GSMUA_Achr5P02600_001	Banana	cytosol	49.07	48.06
Bra031331.1-P	Field mustard	cytosol	42.33	47.4
CDY37387	Canola	cytosol	42.09	47.14
VIT_06s0009g00210.t01	Wine grape	cytosol	48.37	46.74
CDY24286	Canola	cytosol	43.49	46.29
KRH22612	Soybean	cytosol	45.58	46.12
CDY10618	Canola	cytosol	43.49	46.06
CDX92933	Canola	cytosol, plastid	42.79	45.89
KRH26707	Soybean	cytosol	44.65	45.5
AT3G22190.2	Thale cress	cytosol	43.95	44.79
GSMUA_Achr4P22800_001	Banana	cytosol	44.65	44.24
Solyc11g071840.1.1	Tomato	cytosol	44.42	42.63
KRH39086	Soybean	cytosol	43.02	42.63
Bra001855.1-P	Field mustard	cytosol	33.95	42.57
CDX92931	Canola	mitochondrion, nucleus	24.88	41.96
CDY39505	Canola	cytosol	38.37	41.77
CDY58749	Canola	cytosol	43.02	40.57
TraesCS5A01G029600.3	Wheat	nucleus	40.93	40.55
Bra023846.1-P	Field mustard	cytosol	38.14	39.33
CDY24282	Canola	mitochondrion	26.51	37.38
TraesCS5A01G373000.1	Wheat	nucleus	37.44	36.93
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	30.23	29.68
TraesCS3A01G251400.1	Wheat	cytosol	26.28	26.22
TraesCS1A01G362400.1	Wheat	mitochondrion	23.02	24.21
TraesCS7A01G112000.1	Wheat	nucleus	17.44	22.94
TraesCS1A01G064100.1	Wheat	cytosol	25.35	22.71
TraesCS3A01G352500.1	Wheat	cytosol	24.42	21.04
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	24.65	19.96
TraesCS7A01G317400.2	Wheat	nucleus	24.88	19.67
TraesCS1A01G288100.2	Wheat	nucleus	19.77	16.31
TraesCS3A01G398900.1	Wheat	cytosol	20.0	13.8

Protein Annotations

EnsemblPlants:TraesCS5A01G425800.1	EnsemblPlantsGene:TraesCS5A01G425800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF47	PFAM:PF00612	PFscan:PS50096
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:611132878..611137577

Molecular Weight (calculated)

47777.3 Da

IEP (calculated)

10.680

GRAVY (calculated)

-0.805

Length

430 amino acids

Sequence
(BLAST)

001: MRWLKSFVGL RKVERQQHQQ RRKEDGDAGR TKRDAVDQFH FQDQHSQDHA SLVGPEEFPD GNVPSEDDCS TPSCSGPGFS TLSVPLPQTE EELKEIWAAT
101: IIQTAYRALL ARRARRALKG LVRLQALVRG HIVRKQAAIT LRCMQALVRV QARVRARRVR VSLENQMDEQ QNNVEEQTGE AHVREVEDGW CDSIGSVEDI
201: QAKLLKRQEA AAKRERAMAY ALSHQWQAGS RQQAAITASE LDRNSWSWNW LERWMAVRPW ESRFLGMYAA DGIAIDTGAQ HAEGNATKAP YRKPVKKQVS
301: ALHSNVLIQK ARPSNSEGGG SSSNPSAGSA SAKPKRKLPP KEGSDEVSSR LSGLGVRSSS NPKERPGQLQ PRANKRFSLP GTGTETGKRQ VNKPAVSRSP
401: KATEDSPALE GKHRRAGSVD LLFKRVELQA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.