Factsheet for TraesCS7A01G112000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G107600.2	Wheat	nucleus	99.08	99.08
HORVU7Hr1G023980.1	Barley	nucleus	98.47	98.47
TraesCS7B01G010100.1	Wheat	nucleus	98.47	98.47
HORVU7Hr1G024060.1	Barley	plastid	52.91	98.3
EER87873	Sorghum	nucleus	76.45	75.08
Zm00001d045305_P001	Maize	nucleus	76.76	74.93
Os06t0155300-01	Rice	plasma membrane	78.29	72.52
Zm00001d009320_P001	Maize	nucleus	40.06	56.71
GSMUA_Achr6P14440_001	Banana	nucleus	23.55	45.03
GSMUA_Achr2P20050_001	Banana	nucleus	38.23	42.23
CDY32322	Canola	cytosol, plastid	33.33	42.08
VIT_19s0014g01690.t01	Wine grape	cytosol	39.76	42.07
Bra021588.1-P	Field mustard	cytosol, plastid	33.95	42.05
AT3G15050.1	Thale cress	plastid	33.03	41.7
Solyc12g014130.1.1	Tomato	nucleus	33.03	41.38
CDY20099	Canola	cytosol	33.33	41.29
KRH27315	Soybean	cytosol	35.78	39.8
PGSC0003DMT400039646	Potato	mitochondrion	35.17	38.85
KRH55128	Soybean	mitochondrion, nucleus	34.86	38.51
KRH22000	Soybean	plastid	36.39	34.69
TraesCS5A01G029600.3	Wheat	nucleus	26.91	20.28
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	26.61	19.86
TraesCS5A01G373000.1	Wheat	nucleus	25.38	19.04
TraesCS3A01G251400.1	Wheat	cytosol	24.77	18.79
TraesCS1A01G064100.1	Wheat	cytosol	26.61	18.12
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	22.94	17.44
TraesCS3A01G352500.1	Wheat	cytosol	25.99	17.03
TraesCS1A01G362400.1	Wheat	mitochondrion	20.8	16.63
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	25.99	16.01
TraesCS7A01G317400.2	Wheat	nucleus	23.24	13.97
TraesCS1A01G288100.2	Wheat	nucleus	22.02	13.82
TraesCS3A01G398900.1	Wheat	cytosol	22.02	11.56

Protein Annotations

EnsemblPlants:TraesCS7A01G112000.1	EnsemblPlantsGene:TraesCS7A01G112000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93	PFscan:PS50096	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:68858833..68861364

Molecular Weight (calculated)

36697.7 Da

IEP (calculated)

11.549

GRAVY (calculated)

-1.133

Length

327 amino acids

Sequence
(BLAST)

001: MGSGDWFKTI ISKKKSKRGK SKHAKKVAAQ RNGANLPQQK PSNAPSSSSD PEDNAALEDW AATRIQNAFR RHKARRTLRC LRGVKRLRIV GQSNPVTKQT
101: SATLSYIQSW NKLQAELRNR RAFMVTEGRN RKKKQENQVK LDAKLQNLQV AWNGGSNTMD EIVARIHLRE EAAVKRERAM AYAFNHQWRA KSATSQGNFN
201: YGVGNGGWGW SWMDRWIAAR PWEPRSMVTP ENPKKGQSKK DNTSTNQSAL KLQGAISLSN NTSDRKVPKK KSSPSPDKKK PVAKTEQKPV AKTEQKPKAA
301: GPPKAKSKDM KRNQEKQQQP AVPAITA

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.