Factsheet for Bra021588.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20099	Canola	cytosol	95.45	95.45
AT3G15050.1	Thale cress	plastid	81.06	82.63
Bra005462.1-P	Field mustard	cytosol, plastid	47.35	47.17
Solyc12g014130.1.1	Tomato	nucleus	43.56	44.06
Bra021888.1-P	Field mustard	plastid	42.8	43.63
KRH55128	Soybean	mitochondrion, nucleus	48.48	43.24
KRH27315	Soybean	cytosol	46.97	42.18
GSMUA_Achr6P14440_001	Banana	nucleus	27.27	42.11
VIT_19s0014g01690.t01	Wine grape	cytosol	48.86	41.75
PGSC0003DMT400039646	Potato	mitochondrion	46.21	41.22
GSMUA_Achr2P20050_001	Banana	nucleus	43.94	39.19
HORVU7Hr1G024060.1	Barley	plastid	25.0	37.5
KRH22000	Soybean	plastid	46.97	36.15
EER87873	Sorghum	nucleus	45.45	36.04
Zm00001d045305_P001	Maize	nucleus	45.45	35.82
HORVU7Hr1G023980.1	Barley	nucleus	42.05	33.95
TraesCS7A01G112000.1	Wheat	nucleus	42.05	33.95
TraesCS7D01G107600.2	Wheat	nucleus	41.67	33.64
TraesCS7B01G010100.1	Wheat	nucleus	41.29	33.33
Os06t0155300-01	Rice	plasma membrane	43.56	32.58
Zm00001d009320_P001	Maize	nucleus	24.62	28.14
Bra031331.1-P	Field mustard	cytosol	32.2	22.14
Bra034294.1-P	Field mustard	nucleus	31.82	21.16
Bra016042.1-P	Field mustard	cytosol	28.41	18.2
Bra001855.1-P	Field mustard	cytosol	22.35	17.2
Bra023846.1-P	Field mustard	cytosol	25.38	16.07
Bra025971.1-P	Field mustard	nucleus	22.73	16.0
Bra034081.1-P	Field mustard	nucleus	26.14	15.54
Bra033443.1-P	Field mustard	cytosol	25.76	15.28
Bra028854.1-P	Field mustard	nucleus, plastid	25.38	15.06
Bra009554.1-P	Field mustard	cytosol	25.76	14.44
Bra017988.1-P	Field mustard	nucleus	17.42	13.14
Bra000717.1-P	Field mustard	nucleus	21.21	12.96
Bra007471.1-P	Field mustard	nucleus	23.86	12.7
Bra001299.1-P	Field mustard	nucleus	22.35	12.47
Bra033284.1-P	Field mustard	nucleus	23.48	11.79
Bra017997.1-P	Field mustard	nucleus, plastid	20.83	11.58
Bra037689.1-P	Field mustard	cytosol	22.73	11.39
Bra019589.1-P	Field mustard	nucleus	20.45	11.37
Bra000930.1-P	Field mustard	mitochondrion, nucleus	22.35	11.24
Bra000318.1-P	Field mustard	nucleus	22.35	9.92
Bra004776.1-P	Field mustard	nucleus	22.35	9.44

Protein Annotations

EnsemblPlants:Bra021588.1	EnsemblPlants:Bra021588.1-P	EnsemblPlantsGene:Bra021588	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93	PFAM:PF00612	PFscan:PS50096
UniParc:UPI0002544184	UniProt:M4DYJ2	MapMan:35.1	:	:	:

Description

AT3G15050 (E=3e-117) IQD10 | IQD10 (IQ-domain 10); calmodulin binding

Coordinates

chrA01:+:24324528..24325489

Molecular Weight (calculated)

30275.5 Da

IEP (calculated)

11.129

GRAVY (calculated)

-0.717

Length

264 amino acids

Sequence
(BLAST)

001: MGSGWLLRSL ICFKAEKHKK SNQSNVHSET LNRVKPVESS SASTTLTVEI AATRIQKAFR AYKARKRLCS LKSARRFNAL IQGHTVRNQT SIALNVMHSW
101: CDIQSQIRAR RMYMVTQGRL QNKRLENRLK LEIKLHEIEV EWCGGSETMD EILARIQQRE EATVKRERAM AYAFSHQWRA NATQYLGQAS FNLDKENWGW
201: SWKERWIAAR PWEIRTQCLV AKPIKPATKR EKLSPPNVST KKTSAKPGLP NTKEAAKSRT PGSG

Best Arabidopsis Sequence Match ( AT3G15050.1 )
(BLAST)

001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG

Arabidopsis Description

IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.