CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045305_P001	Maize	nucleus	95.5	94.93
Os06t0155300-01	Rice	plasma membrane	83.18	78.47
HORVU7Hr1G024060.1	Barley	plastid	41.44	78.41
TraesCS7A01G112000.1	Wheat	nucleus	75.08	76.45
TraesCS7D01G107600.2	Wheat	nucleus	74.77	76.15
HORVU7Hr1G023980.1	Barley	nucleus	74.47	75.84
TraesCS7B01G010100.1	Wheat	nucleus	74.17	75.54
Zm00001d009320_P001	Maize	nucleus	52.25	75.32
GSMUA_Achr6P14440_001	Banana	nucleus	24.92	48.54
VIT_19s0014g01690.t01	Wine grape	cytosol	42.64	45.95
Bra021588.1-P	Field mustard	cytosol, plastid	36.04	45.45
CDY20099	Canola	cytosol	36.04	45.45
CDY32322	Canola	cytosol, plastid	35.14	45.17
AT3G15050.1	Thale cress	plastid	34.83	44.79
Solyc12g014130.1.1	Tomato	nucleus	34.23	43.68
GSMUA_Achr2P20050_001	Banana	nucleus	38.14	42.91
PGSC0003DMT400039646	Potato	mitochondrion	36.64	41.22
KRH27315	Soybean	cytosol	35.74	40.48
KRH55128	Soybean	mitochondrion, nucleus	35.74	40.2
KRH22000	Soybean	plastid	37.24	36.15
KXG21175	Sorghum	cytosol	30.03	21.14
OQU86150	Sorghum	cytosol	27.63	20.72
EER91163	Sorghum	cytosol	25.53	20.14
KXG33651	Sorghum	cytosol	30.03	20.08
KXG24027	Sorghum	cytosol	24.62	18.64
EER90769	Sorghum	mitochondrion	24.02	18.18
EES03502	Sorghum	mitochondrion	23.72	18.08
OQU78148	Sorghum	cytosol	23.42	13.93
EES14418	Sorghum	cytosol	23.72	13.76
KXG22437	Sorghum	mitochondrion, plastid	22.22	13.55
EES01898	Sorghum	cytosol	20.42	12.08

Protein Annotations

MapMan:35.1	UniProt:C5Z4E0	ncoils:Coil	EnsemblPlants:EER87873	ProteinID:EER87873	ProteinID:EER87873.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0003964	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006259	GO:GO:0006278	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ProteinID:OQU75849.1	ProteinID:OQU75850.1	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93
EnsemblPlantsGene:SORBI_3010G043600	UniParc:UPI0001C80642	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3392869..3397040

Molecular Weight (calculated)

37495.6 Da

IEP (calculated)

11.270

GRAVY (calculated)

-1.162

Length

333 amino acids

Sequence
(BLAST)

001: MGSGDWFKTI ISKKKSKRAK SKHAKLSGQV TNGSNQTNQK LNGPSSSSDD HEDNAALEEW AATRIQNAFR KYRARKTLRC LRGVKRLRVV GQANPVKKQT
101: AATLSYIQSW NKLQSEIRNR RAFMVTEGRN RKKKQENQMK LEAKLHNLQV EWNGGSDTMD EILARIQQRE EAAVKRERAM AYAFNHQWRA RSATSLGNFS
201: YEVGKGGWGW SWMDRWIAAR PWEPRSLVHP ENPKKAQAKK ENSANPSALK LQGSITLSNN INDRKTPKKK PLPSPSPTDQ KKPSPSPSSD QKKPVPKEQR
301: AKAAGTPPKP KAKDMKGSQE KKPQQKVAPS VSA

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.