Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87873 | Sorghum | nucleus | 78.47 | 83.18 |
| Zm00001d045305_P001 | Maize | nucleus | 78.75 | 82.99 |
| HORVU7Hr1G024060.1 | Barley | plastid | 39.66 | 79.55 |
| HORVU7Hr1G023980.1 | Barley | nucleus | 72.52 | 78.29 |
| TraesCS7D01G107600.2 | Wheat | nucleus | 72.52 | 78.29 |
| TraesCS7A01G112000.1 | Wheat | nucleus | 72.52 | 78.29 |
| TraesCS7B01G010100.1 | Wheat | nucleus | 72.24 | 77.98 |
| Zm00001d009320_P001 | Maize | nucleus | 42.78 | 65.37 |
| GSMUA_Achr6P14440_001 | Banana | nucleus | 23.23 | 47.95 |
| CDY32322 | Canola | cytosol, plastid | 32.58 | 44.4 |
| CDY20099 | Canola | cytosol | 33.14 | 44.32 |
| AT3G15050.1 | Thale cress | plastid | 32.29 | 44.02 |
| VIT_19s0014g01690.t01 | Wine grape | cytosol | 38.53 | 44.01 |
| Bra021588.1-P | Field mustard | cytosol, plastid | 32.58 | 43.56 |
| GSMUA_Achr2P20050_001 | Banana | nucleus | 36.26 | 43.24 |
| Solyc12g014130.1.1 | Tomato | nucleus | 30.88 | 41.76 |
| KRH27315 | Soybean | cytosol | 33.43 | 40.14 |
| KRH55128 | Soybean | mitochondrion, nucleus | 33.43 | 39.86 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 33.43 | 39.86 |
| KRH22000 | Soybean | plastid | 33.99 | 34.99 |
| Os01t0194200-01 | Rice | cytosol | 26.06 | 20.81 |
| Os12t0619000-01 | Rice | cytosol | 25.78 | 20.59 |
| Os03t0648300-01 | Rice | cytosol | 24.36 | 19.55 |
| Os03t0787200-01 | Rice | cytosol | 22.95 | 19.19 |
| Os05t0123200-01 | Rice | plasma membrane | 24.65 | 18.35 |
| Os05t0541100-01 | Rice | plastid | 20.96 | 18.14 |
| Os01t0833800-01 | Rice | plasma membrane | 24.36 | 17.2 |
| Os01t0708700-01 | Rice | cytosol | 20.96 | 16.78 |
| Os08t0115200-01 | Rice | cytosol | 21.25 | 13.81 |
| Os05t0463300-00 | Rice | plasma membrane | 19.55 | 13.74 |
| Os01t0896200-01 | Rice | mitochondrion | 12.46 | 13.06 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4340174 | EMBL:AK099462 | ProteinID:BAD69297.1 | ProteinID:BAD69409.1 | ProteinID:BAF18763.1 |
| ProteinID:BAS96234.1 | ncoils:Coil | ProteinID:EAZ35875.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006412 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009405 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0017148 | GO:GO:0019538 |
| GO:GO:0030598 | GO:GO:0090729 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | EnsemblPlantsGene:Os06g0155300 | EnsemblPlants:Os06t0155300-01 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF93 | UniProt:Q5VMB6 | UniParc:UPI00004580F1 | RefSeq:XP_015642904.1 |
| RefSeq:XP_015642905.1 | RefSeq:XP_015642906.1 | RefSeq:XP_015642907.1 | SEG:seg | : | : |
Description
IQ calmodulin-binding region domain containing protein. (Os06t0155300-01);Similar to calmodulin binding protein. (Os06t0155300-02)
Coordinates
chr6:+:2855669..2859559
Molecular Weight (calculated)
39387.0 Da
IEP (calculated)
11.122
GRAVY (calculated)
-1.093
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGDWFKTI ISKKKSKRGK SKHAKVAGQV PNGPNSTNQK SNNGPSSSSD PEDNAALEEW AATRIQNAFR CYKAKKTLRC LKGVKRLHII GQTNPVNKQT
101: AATLNYIQSW NKLQAEIRNR RAFMVTEGRN RKKKQENQMK LEAKLQNLQV EWNGGSDTME EILGRIQQRE EAAVKRERAM AYAFNHQWRA RSATSLGNFN
201: YEVGKGGWGW SWMDRWIAAR PWEPRSLVHP ENLKKGQAKK ENASTNPSAL KLQGSISLSN NINDRKAPKK KSSPSPPDQK KPVAASPPDQ KKPVALSPPD
301: HKKTVTPSPP DQKKPVARVQ KAKAAGPPKA KPKDMKGGQQ KKQQQLEVPS LSV
101: AATLNYIQSW NKLQAEIRNR RAFMVTEGRN RKKKQENQMK LEAKLQNLQV EWNGGSDTME EILGRIQQRE EAAVKRERAM AYAFNHQWRA RSATSLGNFN
201: YEVGKGGWGW SWMDRWIAAR PWEPRSLVHP ENLKKGQAKK ENASTNPSAL KLQGSISLSN NINDRKAPKK KSSPSPPDQK KPVAASPPDQ KKPVALSPPD
301: HKKTVTPSPP DQKKPVARVQ KAKAAGPPKA KPKDMKGGQQ KKQQQLEVPS LSV
001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
Arabidopsis Description
iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.