Factsheet for Os08t0115200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G317400.2	Wheat	nucleus	84.71	84.56
HORVU7Hr1G075720.1	Barley	plasma membrane	84.53	84.07
TraesCSU01G104800.3	Wheat	nucleus	83.98	83.67
TraesCS7B01G218800.3	Wheat	nucleus	83.79	83.49
Zm00001d049684_P002	Maize	cytosol, mitochondrion	78.82	78.68
EES14418	Sorghum	cytosol	83.06	78.57
GSMUA_Achr1P18950_001	Banana	nucleus	60.96	72.27
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	61.14	72.02
GSMUA_Achr1P16160_001	Banana	nucleus	57.09	69.2
Solyc10g005000.2.1	Tomato	nucleus	41.25	56.85
VIT_15s0048g02680.t01	Wine grape	nucleus	57.64	56.19
PGSC0003DMT400029325	Potato	mitochondrion	34.25	56.02
KRH47821	Soybean	nucleus	55.8	55.49
KRH06386	Soybean	mitochondrion, nucleus	55.8	55.09
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	53.22	54.12
VIT_16s0098g01070.t01	Wine grape	mitochondrion, nucleus	43.83	51.52
AT4G00820.1	Thale cress	mitochondrion, nucleus	50.46	51.31
CDY15200	Canola	nucleus	48.25	51.27
CDX90011	Canola	nucleus	47.7	50.98
PGSC0003DMT400031576	Potato	nucleus	45.86	50.2
Bra033284.1-P	Field mustard	nucleus	48.62	50.19
Solyc08g083240.2.1	Tomato	nucleus	45.12	50.1
AT1G01110.2	Thale cress	nucleus	47.51	48.96
CDY69140	Canola	mitochondrion, nucleus	47.33	48.95
CDX91859	Canola	mitochondrion, nucleus	47.7	48.87
Bra000930.1-P	Field mustard	mitochondrion, nucleus	46.04	47.62
CDY05111	Canola	nucleus	36.65	46.39
Bra000717.1-P	Field mustard	nucleus	36.83	46.3
CDX90766	Canola	nucleus	36.65	46.17
AT4G10640.1	Thale cress	nucleus	34.25	43.97
Solyc01g009340.2.1	Tomato	nucleus	27.26	36.72
CDY08131	Canola	nucleus	22.84	36.05
PGSC0003DMT400038175	Potato	cytosol	34.07	35.78
Bra017988.1-P	Field mustard	nucleus	23.02	35.71
CDY05931	Canola	nucleus	22.84	35.23
AT3G49380.1	Thale cress	nucleus	22.28	34.38
Os01t0833800-01	Rice	plasma membrane	27.26	29.6
Os05t0123200-01	Rice	plasma membrane	25.05	28.69
Os05t0541100-01	Rice	plastid	19.89	26.47
Os01t0194200-01	Rice	cytosol	21.36	26.24
Os12t0619000-01	Rice	cytosol	20.26	24.89
Os01t0708700-01	Rice	cytosol	20.07	24.72
Os03t0787200-01	Rice	cytosol	18.97	24.41
Os05t0463300-00	Rice	plasma membrane	20.63	22.31
Os01t0896200-01	Rice	mitochondrion	13.63	21.96
Os06t0155300-01	Rice	plasma membrane	13.81	21.25
Os03t0648300-01	Rice	cytosol	16.57	20.45

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EntrezGene:4344513	ProteinID:BAD10560.1	ProteinID:BAF22765.1	ProteinID:BAT03546.1
InterPro:DUF4005	ProteinID:EAZ41306.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	EnsemblPlantsGene:Os08g0115200	EnsemblPlants:Os08t0115200-01	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096
PANTHER:PTHR32295	PANTHER:PTHR32295:SF0	UniProt:Q6YXT2	SMART:SM00015	UniParc:UPI000023B0F0	RefSeq:XP_015648897.1
SEG:seg	:	:	:	:	:

Description

IQ calmodulin-binding region domain containing protein. (Os08t0115200-01)

Coordinates

chr8:-:795470..797479

Molecular Weight (calculated)

59021.8 Da

IEP (calculated)

11.501

GRAVY (calculated)

-0.742

Length

543 amino acids

Sequence
(BLAST)

001: MGKKAGTTSS WLTAVKRAFR SPSKDDSPNK AARLRDDTDD DKGKRERRRW LFRKSSSPSP APPTPPPPQQ QQQQSRAAAV TEEQRHAIAL AVATAATAEA
101: AVATAQAAAE VVRLTRPSSS FVREHYAAIV VQTAFRGYLA RRALRALKGL VKLQALVRGH NVRKQANMTL RCMQALVRVQ ARVRDQRMRL SQDSISLSAA
201: AASAAPCGSS KSSYSVDTST FWDSKYTHDF AAADRRSIER SRDGSSFAAG DDWDDRPRTI EEIQAMLQTR KDAALKRERA LSYAFSHQIW RNPAPSVEEM
301: DVDGQPRWAE RWMASRASFD TSRSTVRASA AAAPGRASTD HRDQVKTLEI DTARPFSYST PRRHGNASYH ASSSPMHRAH HHSPVTPSPS KARPPIQVRS
401: ASPRVERGGG GGGSYTPSLH SHRHHASSGG AAAVPNYMAA TESAKARVRS QSAPRQRPAT PERDRMSFGG GGGGGGAKKR LSFPVPIDPY GAYAQSLRSP
501: SFKSAAGRFS SEQRSNVSSS CAESLGGDVV SPSSTTDLRR WLR

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.