Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017988.1-P | Field mustard | nucleus | 98.26 | 96.57 |
| CDY05931 | Canola | nucleus | 94.48 | 92.33 |
| AT3G49380.1 | Thale cress | nucleus | 75.87 | 74.15 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 13.95 | 30.97 |
| VIT_16s0098g01070.t01 | Wine grape | mitochondrion, nucleus | 38.08 | 28.36 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 34.3 | 25.76 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 34.01 | 25.38 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 32.27 | 24.78 |
| CDY15200 | Canola | nucleus | 35.47 | 23.87 |
| CDX90011 | Canola | nucleus | 34.3 | 23.23 |
| TraesCS7A01G317400.2 | Wheat | nucleus | 36.63 | 23.16 |
| TraesCS7B01G218800.3 | Wheat | nucleus | 36.63 | 23.12 |
| Solyc01g009340.2.1 | Tomato | nucleus | 27.03 | 23.08 |
| HORVU7Hr1G075720.1 | Barley | plasma membrane | 36.63 | 23.08 |
| TraesCSU01G104800.3 | Wheat | nucleus | 36.34 | 22.94 |
| CDY05111 | Canola | nucleus | 28.49 | 22.84 |
| Os08t0115200-01 | Rice | cytosol | 36.05 | 22.84 |
| CDX90766 | Canola | nucleus | 27.91 | 22.27 |
| PGSC0003DMT400038175 | Potato | cytosol | 33.43 | 22.24 |
| CDX96427 | Canola | cytosol | 15.7 | 22.22 |
| CDY69140 | Canola | mitochondrion, nucleus | 33.72 | 22.1 |
| CDY35313 | Canola | nucleus | 25.29 | 21.91 |
| CDX91859 | Canola | mitochondrion, nucleus | 33.72 | 21.89 |
| CDX77034 | Canola | cytosol | 25.0 | 21.72 |
| EES14418 | Sorghum | cytosol | 36.05 | 21.6 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 33.72 | 21.32 |
| CDX72935 | Canola | cytosol | 16.28 | 21.29 |
| CDX95328 | Canola | cytosol | 24.71 | 19.1 |
| CDY23202 | Canola | cytosol | 24.71 | 19.1 |
| CDY37387 | Canola | cytosol | 20.93 | 18.75 |
| CDY11238 | Canola | cytosol, plastid | 22.38 | 18.64 |
| CDY32322 | Canola | cytosol, plastid | 13.95 | 18.53 |
| CDY05917 | Canola | mitochondrion, nucleus | 25.58 | 18.53 |
| CDX80849 | Canola | cytosol, plastid | 22.67 | 18.31 |
| CDY39505 | Canola | cytosol | 20.93 | 18.23 |
| CDY10618 | Canola | cytosol | 21.51 | 18.23 |
| CDY17214 | Canola | cytosol, plastid | 13.95 | 18.11 |
| CDX92933 | Canola | cytosol, plastid | 20.93 | 17.96 |
| CDY24286 | Canola | cytosol | 20.93 | 17.82 |
| CDY04876 | Canola | nucleus, plastid | 22.97 | 17.75 |
| CDY27925 | Canola | plastid | 13.66 | 17.74 |
| CDY08120 | Canola | mitochondrion, nucleus | 24.42 | 17.72 |
| CDY55696 | Canola | nucleus, plastid | 22.38 | 17.62 |
| CDY10410 | Canola | cytosol, plastid | 22.38 | 17.34 |
| CDY26241 | Canola | nucleus | 18.9 | 17.33 |
| CDY48305 | Canola | nucleus | 18.9 | 17.33 |
| CDX86983 | Canola | nucleus | 23.84 | 17.26 |
| CDY30433 | Canola | cytosol | 22.38 | 17.11 |
| CDY20099 | Canola | cytosol | 13.08 | 17.05 |
| CDY23391 | Canola | cytosol | 22.67 | 16.92 |
| CDY00196 | Canola | nucleus | 23.26 | 16.84 |
| CDY58749 | Canola | cytosol | 21.8 | 16.45 |
| CDY05984 | Canola | nucleus | 22.97 | 15.96 |
| CDY62768 | Canola | cytosol | 12.79 | 15.88 |
| CDX71881 | Canola | nucleus | 22.67 | 15.79 |
| CDX70333 | Canola | cytosol | 21.51 | 15.42 |
| CDY38525 | Canola | cytosol | 16.86 | 14.04 |
| CDX79809 | Canola | nucleus | 24.13 | 13.88 |
| CDY66694 | Canola | nucleus | 23.55 | 13.52 |
| CDY07937 | Canola | nucleus | 17.44 | 12.55 |
| CDX73992 | Canola | nucleus | 17.15 | 12.37 |
| CDY44247 | Canola | nucleus | 19.77 | 12.23 |
| CDX83468 | Canola | plasma membrane | 19.48 | 12.16 |
| CDY05918 | Canola | mitochondrion | 11.05 | 12.1 |
| CDX83237 | Canola | cytosol | 17.15 | 11.64 |
| CDY22198 | Canola | cytosol | 18.9 | 11.63 |
| CDY41307 | Canola | cytosol | 17.44 | 10.97 |
| CDX96426 | Canola | nucleus, plastid | 3.2 | 10.78 |
| CDX72934 | Canola | nucleus, plastid | 3.2 | 10.78 |
| CDX92931 | Canola | mitochondrion, nucleus | 7.56 | 10.2 |
| CDY24282 | Canola | mitochondrion | 7.27 | 8.2 |
Protein Annotations
| EnsemblPlants:CDY08131 | EnsemblPlantsGene:GSBRNA2T00125422001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF92 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY08131 | ProteinID:CDY08131.1 | SEG:seg |
| SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI0004EEA98C | UniProt:A0A078F468 | MapMan:35.2 | : |
Description
BnaA06g15950DBnaA06g15950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F468]
Coordinates
chrLK031983:-:580252..581902
Molecular Weight (calculated)
39479.8 Da
IEP (calculated)
10.966
GRAVY (calculated)
-0.909
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKNGGSSWL TAVKNVFRSP EKKCPRRRER QQDNGLVQED EEEQQQQTKR GKRRWLFKKA SSDSCARDVG INIKNAVNTA IAVDETEKKA SPTAKEAVFF
101: CRTSVYLKRH LAAIFIQTAY RGCLARKAFK ALKGVVLLQA LVRGHNVRRR ASITLLRVQA LVRVQARVLD HRKKLTASPG DGTTLSGAFS KQMWRTTARE
201: AHSESELEDK RPSRLNRFGY QEIGRRLSTD QTIVEPVKIV EIDTYNTYSH HQQLNNRTPR GNSRVTRQGQ SIPNYMSTTA STVARFRPQS APRQRSNQTG
301: LDDNEPRLQL VRKRLSFHKD IPQSHGYFWY DKKTDDHDHE DVQH
101: CRTSVYLKRH LAAIFIQTAY RGCLARKAFK ALKGVVLLQA LVRGHNVRRR ASITLLRVQA LVRVQARVLD HRKKLTASPG DGTTLSGAFS KQMWRTTARE
201: AHSESELEDK RPSRLNRFGY QEIGRRLSTD QTIVEPVKIV EIDTYNTYSH HQQLNNRTPR GNSRVTRQGQ SIPNYMSTTA STVARFRPQS APRQRSNQTG
301: LDDNEPRLQL VRKRLSFHKD IPQSHGYFWY DKKTDDHDHE DVQH
001: MGKTDGSSWF TAVKNVFRSP EKLIPRRINR RQDNDLVEEV EDELHQRPKR RKRRWLFKKV SSDPCAINVG INTTSTAINA IAAEETEKTV SPAAKETVFF
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
Arabidopsis Description
iqd15IQ-domain 15 [Source:UniProtKB/TrEMBL;Acc:Q9SG11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.