Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | CDX86457 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDY58518 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028854.1-P | Field mustard | nucleus, plastid | 98.65 | 98.65 |
| CDY55696 | Canola | nucleus, plastid | 93.48 | 95.19 |
| CDX80849 | Canola | cytosol, plastid | 85.17 | 88.97 |
| CDY11238 | Canola | cytosol, plastid | 82.02 | 88.38 |
| CDY10410 | Canola | cytosol, plastid | 85.84 | 86.04 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 86.74 | 83.73 |
| CDX70333 | Canola | cytosol | 83.6 | 77.5 |
| KRG95941 | Soybean | nucleus | 53.93 | 50.31 |
| KRH67648 | Soybean | nucleus | 52.36 | 48.85 |
| KRH19825 | Soybean | cytosol | 51.01 | 48.3 |
| KRH32420 | Soybean | cytosol | 51.24 | 48.1 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 51.24 | 47.6 |
| CDX73992 | Canola | nucleus | 51.01 | 47.59 |
| Solyc10g084280.1.1 | Tomato | nucleus | 50.56 | 47.07 |
| Solyc10g086060.1.1 | Tomato | cytosol | 49.66 | 46.92 |
| GSMUA_Achr10P... | Banana | nucleus | 47.42 | 46.89 |
| PGSC0003DMT400027139 | Potato | cytosol | 50.34 | 46.57 |
| PGSC0003DMT400045333 | Potato | cytosol | 49.21 | 46.5 |
| CDY07937 | Canola | nucleus | 49.89 | 46.44 |
| PGSC0003DMT400004433 | Potato | cytosol | 49.89 | 46.25 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 48.99 | 45.61 |
| Solyc09g007410.2.1 | Tomato | cytosol | 49.44 | 45.55 |
| KXG21175 | Sorghum | cytosol | 47.64 | 44.82 |
| Zm00001d035492_P009 | Maize | cytosol | 47.87 | 44.75 |
| Os05t0123200-01 | Rice | plasma membrane | 47.64 | 44.73 |
| Zm00001d010975_P003 | Maize | cytosol | 47.19 | 43.93 |
| CDY41307 | Canola | cytosol | 53.71 | 43.69 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 46.97 | 43.54 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 46.74 | 43.51 |
| CDY22198 | Canola | cytosol | 54.61 | 43.47 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 47.19 | 43.39 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 46.52 | 43.12 |
| CDX95328 | Canola | cytosol | 42.7 | 42.7 |
| CDY23202 | Canola | cytosol | 42.47 | 42.47 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 43.6 | 42.27 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 43.82 | 41.31 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 42.47 | 40.65 |
| GSMUA_Achr10P... | Banana | cytosol | 37.53 | 39.57 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 44.04 | 39.52 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 43.82 | 37.07 |
| Os01t0833800-01 | Rice | plasma membrane | 41.57 | 37.0 |
| KXG33651 | Sorghum | cytosol | 41.12 | 36.75 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 41.12 | 36.67 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 41.12 | 36.67 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 41.12 | 36.67 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 41.12 | 36.67 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 43.6 | 36.53 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.53 | 36.15 |
| Zm00001d042973_P007 | Maize | cytosol | 40.67 | 35.7 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 44.27 | 33.73 |
| CDY17214 | Canola | cytosol, plastid | 19.78 | 33.21 |
| CDY27925 | Canola | plastid | 19.78 | 33.21 |
| CDY38525 | Canola | cytosol | 28.76 | 30.99 |
| CDY62768 | Canola | cytosol | 18.65 | 29.96 |
| CDY37387 | Canola | cytosol | 25.39 | 29.43 |
| CDX77034 | Canola | cytosol | 25.39 | 28.54 |
| CDY35313 | Canola | nucleus | 25.39 | 28.46 |
| CDY24286 | Canola | cytosol | 25.62 | 28.22 |
| CDY10618 | Canola | cytosol | 25.62 | 28.08 |
| Os05t0463300-00 | Rice | plasma membrane | 31.46 | 27.89 |
| CDX92933 | Canola | cytosol, plastid | 24.94 | 27.68 |
| CDX96427 | Canola | cytosol | 15.06 | 27.57 |
| CDY32322 | Canola | cytosol, plastid | 15.96 | 27.41 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 31.46 | 27.24 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 32.36 | 27.22 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 31.46 | 26.87 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 31.46 | 26.52 |
| CDY20099 | Canola | cytosol | 15.51 | 26.14 |
| CDX83237 | Canola | cytosol | 29.66 | 26.04 |
| CDX92931 | Canola | mitochondrion, nucleus | 14.83 | 25.88 |
| CDX72935 | Canola | cytosol | 15.28 | 25.86 |
| OQU78148 | Sorghum | cytosol | 32.13 | 25.54 |
| CDY30433 | Canola | cytosol | 25.62 | 25.33 |
| CDY05917 | Canola | mitochondrion, nucleus | 26.74 | 25.05 |
| CDX71881 | Canola | nucleus | 27.64 | 24.9 |
| CDY08120 | Canola | mitochondrion, nucleus | 26.52 | 24.89 |
| CDY05984 | Canola | nucleus | 27.64 | 24.85 |
| CDX86983 | Canola | nucleus | 26.29 | 24.63 |
| CDY39505 | Canola | cytosol | 21.8 | 24.56 |
| CDY23391 | Canola | cytosol | 25.17 | 24.3 |
| CDY15200 | Canola | nucleus | 27.87 | 24.27 |
| CDX90011 | Canola | nucleus | 27.42 | 24.02 |
| CDY00196 | Canola | nucleus | 25.62 | 24.0 |
| CDY26241 | Canola | nucleus | 20.22 | 24.0 |
| CDY48305 | Canola | nucleus | 20.22 | 24.0 |
| CDY58749 | Canola | cytosol | 24.04 | 23.46 |
| CDY08131 | Canola | nucleus | 17.75 | 22.97 |
| CDY05111 | Canola | nucleus | 21.57 | 22.38 |
| CDY24282 | Canola | mitochondrion | 15.06 | 21.97 |
| CDY05931 | Canola | nucleus | 17.3 | 21.88 |
| CDX90766 | Canola | nucleus | 21.12 | 21.81 |
| CDY69140 | Canola | mitochondrion, nucleus | 25.62 | 21.71 |
| CDX91859 | Canola | mitochondrion, nucleus | 25.62 | 21.51 |
| CDY05918 | Canola | mitochondrion | 15.06 | 21.34 |
| CDX79809 | Canola | nucleus | 28.54 | 21.24 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.79 | 21.08 |
| CDX83468 | Canola | plasma membrane | 25.84 | 20.87 |
| CDY66694 | Canola | nucleus | 27.87 | 20.7 |
| CDY44247 | Canola | nucleus | 25.39 | 20.32 |
| CDX72934 | Canola | nucleus, plastid | 3.37 | 14.71 |
| CDX96426 | Canola | nucleus, plastid | 3.37 | 14.71 |
Protein Annotations
| EnsemblPlants:CDY04876 | EnsemblPlantsGene:GSBRNA2T00119593001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY04876 |
| ProteinID:CDY04876.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EE9AA1 | MapMan:35.1 | : |
Description
BnaAnng00580D
Coordinates
chrLK031958:-:477390..479696
Molecular Weight (calculated)
48629.3 Da
IEP (calculated)
11.299
GRAVY (calculated)
-0.874
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKAKWFSS VKKAFSPDSK KSKRKSPESP NGVISNPPDQ ARQSSPPAPP PLEVRVAEVI VERNINLSPP STDAVNATTS DIHVAPSSSA PPEVVVRPRA
101: AAPPRFAGKS NEEAAAILIQ TVFRGYLAKR ALRAMRGLVR LRLLMEGSVV KRQAANTLKC MQTLSRVQSQ IRARRIRMSE ENQARQKQLL QKHAKELAGL
201: KNGDNWDDSI QSKEKVEAKL LSKYEATMRR ERALAYAYTH QQNWKNNSKS GNPMFMDPSN PTWGWSWLER WMAGRPLDNT SEQNNDNAAS KPITRNNSTQ
301: PNTPSSARGG GGTPRNKNSF FSPPTPSRLN QSSRKSNDDD AKSTISVLSE RNRRHSIAGS SVRDDESLAG SQTLPSYMVP TKSARARVNK PQSPSSGGTT
401: QENDGFTAKK RLSYPASPAL PKPRRFSAPP KVEGGGVAVT NGGGS
101: AAPPRFAGKS NEEAAAILIQ TVFRGYLAKR ALRAMRGLVR LRLLMEGSVV KRQAANTLKC MQTLSRVQSQ IRARRIRMSE ENQARQKQLL QKHAKELAGL
201: KNGDNWDDSI QSKEKVEAKL LSKYEATMRR ERALAYAYTH QQNWKNNSKS GNPMFMDPSN PTWGWSWLER WMAGRPLDNT SEQNNDNAAS KPITRNNSTQ
301: PNTPSSARGG GGTPRNKNSF FSPPTPSRLN QSSRKSNDDD AKSTISVLSE RNRRHSIAGS SVRDDESLAG SQTLPSYMVP TKSARARVNK PQSPSSGGTT
401: QENDGFTAKK RLSYPASPAL PKPRRFSAPP KVEGGGVAVT NGGGS
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.