Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30433 | Canola | cytosol | 83.3 | 85.33 |
| CDY44247 | Canola | nucleus | 70.28 | 58.27 |
| CDX83468 | Canola | plasma membrane | 69.41 | 58.08 |
| CDX79809 | Canola | nucleus | 75.27 | 58.03 |
| CDY66694 | Canola | nucleus | 74.62 | 57.43 |
| CDX71881 | Canola | nucleus | 61.39 | 57.29 |
| CDY05984 | Canola | nucleus | 60.95 | 56.77 |
| AT2G43680.1 | Thale cress | nucleus | 73.75 | 50.82 |
| KRH50198 | Soybean | cytosol | 53.8 | 46.53 |
| KRH71267 | Soybean | cytosol | 53.15 | 45.79 |
| Solyc08g014280.2.1 | Tomato | cytosol | 50.54 | 43.23 |
| PGSC0003DMT400041427 | Potato | cytosol | 49.67 | 42.8 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 54.66 | 42.14 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 35.14 | 37.07 |
| Solyc06g053450.2.1 | Tomato | nucleus | 45.99 | 35.81 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 22.56 | 34.55 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 45.55 | 34.04 |
| Os01t0896200-01 | Rice | mitochondrion | 22.99 | 31.45 |
| EES01898 | Sorghum | cytosol | 37.74 | 30.91 |
| Zm00001d012167_P001 | Maize | cytosol | 37.31 | 29.76 |
| CDY11238 | Canola | cytosol, plastid | 24.73 | 27.6 |
| CDX80849 | Canola | cytosol, plastid | 25.16 | 27.23 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 36.01 | 26.43 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 35.57 | 26.37 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 35.57 | 26.2 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 34.92 | 25.84 |
| CDY10410 | Canola | cytosol, plastid | 24.3 | 25.23 |
| CDY04876 | Canola | nucleus, plastid | 24.3 | 25.17 |
| CDY55696 | Canola | nucleus, plastid | 23.43 | 24.71 |
| CDX96427 | Canola | cytosol | 13.02 | 24.69 |
| CDY23202 | Canola | cytosol | 23.21 | 24.04 |
| CDX72935 | Canola | cytosol | 13.67 | 23.95 |
| CDX95328 | Canola | cytosol | 22.99 | 23.82 |
| CDX70333 | Canola | cytosol | 24.3 | 23.33 |
| CDY17214 | Canola | cytosol, plastid | 13.23 | 23.02 |
| CDY32322 | Canola | cytosol, plastid | 12.8 | 22.78 |
| CDY08131 | Canola | nucleus | 16.92 | 22.67 |
| CDY27925 | Canola | plastid | 13.02 | 22.64 |
| CDY05931 | Canola | nucleus | 16.92 | 22.16 |
| CDY38525 | Canola | cytosol | 19.74 | 22.03 |
| CDY05111 | Canola | nucleus | 20.39 | 21.91 |
| CDY62768 | Canola | cytosol | 13.02 | 21.66 |
| CDY20099 | Canola | cytosol | 12.36 | 21.59 |
| CDY15200 | Canola | nucleus | 23.86 | 21.53 |
| CDX77034 | Canola | cytosol | 18.44 | 21.46 |
| CDY35313 | Canola | nucleus | 18.44 | 21.41 |
| CDX90766 | Canola | nucleus | 19.96 | 21.35 |
| CDX90011 | Canola | nucleus | 23.43 | 21.26 |
| CDX83237 | Canola | cytosol | 22.56 | 20.51 |
| CDX92933 | Canola | cytosol, plastid | 17.79 | 20.45 |
| CDY10618 | Canola | cytosol | 18.0 | 20.44 |
| CDY24286 | Canola | cytosol | 17.79 | 20.3 |
| CDX86983 | Canola | nucleus | 20.61 | 20.0 |
| CDY37387 | Canola | cytosol | 16.49 | 19.79 |
| CDY05917 | Canola | mitochondrion, nucleus | 20.17 | 19.58 |
| CDY00196 | Canola | nucleus | 20.17 | 19.58 |
| CDX91859 | Canola | mitochondrion, nucleus | 22.34 | 19.43 |
| CDY48305 | Canola | nucleus | 15.62 | 19.2 |
| CDY26241 | Canola | nucleus | 15.62 | 19.2 |
| CDY08120 | Canola | mitochondrion, nucleus | 19.52 | 18.99 |
| CDY69140 | Canola | mitochondrion, nucleus | 21.48 | 18.86 |
| CDY39505 | Canola | cytosol | 15.18 | 17.72 |
| CDX72934 | Canola | nucleus, plastid | 3.69 | 16.67 |
| CDX96426 | Canola | nucleus, plastid | 3.69 | 16.67 |
| CDY58749 | Canola | cytosol | 15.84 | 16.01 |
| CDX73992 | Canola | nucleus | 16.49 | 15.93 |
| CDY22198 | Canola | cytosol | 19.09 | 15.74 |
| CDY41307 | Canola | cytosol | 18.44 | 15.54 |
| CDY07937 | Canola | nucleus | 16.05 | 15.48 |
| CDY05918 | Canola | mitochondrion | 10.2 | 14.97 |
| CDX92931 | Canola | mitochondrion, nucleus | 8.03 | 14.51 |
| CDY24282 | Canola | mitochondrion | 8.68 | 13.11 |
Protein Annotations
| EnsemblPlants:CDY23391 | EnsemblPlantsGene:GSBRNA2T00021995001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | ProteinID:CDY23391 | ProteinID:CDY23391.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EEA0D3 |
| UniProt:A0A078GDC3 | MapMan:20.6.2 | : | : | : | : |
Description
BnaC04g49190DBnaC04g49190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDC3]
Coordinates
chrLK032143:+:258361..261065
Molecular Weight (calculated)
50969.1 Da
IEP (calculated)
11.140
GRAVY (calculated)
-0.760
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSLFSA IKGVFTPHSK EKLVNEAERK SGKEKRKKGF GKLKRGESSS FLPIFREPSS IEKILADAER DHNLVFRPPT PPDQSNPPSA SPPPPLRPAS
101: PQVVSPQAVS IKHPSPRPTS PRVASPQATP PRVDAPKVEP STLDAPRTVL PLEIVSRPEP TLLVQHASAA KIQAAFRGYT ARRSFRALKG LVRLQGVVKG
201: YNVKRQTVNA MKYMQKLVRV QSKLQSHRIR TSENQTQVEK DEANTGGNDH WDDSVLTKEE RDARSQRKAD AIIKRERSMA YAYSDKVTPK SAHDVGLPLW
301: WNWGDQQLPP ASHVPSHYML TPTRLSPRYS RGRLRGGSPF KDDDSLTSCP PFPSYMAPTV SAKAKVRPNS NPKERVMGTP SSVRSEKRRV SYPPVQRGED
401: VFRWSKGSLL MSKKGCPGSS SPGGVVAIEK RKTVKSVGNL SVDSTVSMPA TVGKKRFNRY V
101: PQVVSPQAVS IKHPSPRPTS PRVASPQATP PRVDAPKVEP STLDAPRTVL PLEIVSRPEP TLLVQHASAA KIQAAFRGYT ARRSFRALKG LVRLQGVVKG
201: YNVKRQTVNA MKYMQKLVRV QSKLQSHRIR TSENQTQVEK DEANTGGNDH WDDSVLTKEE RDARSQRKAD AIIKRERSMA YAYSDKVTPK SAHDVGLPLW
301: WNWGDQQLPP ASHVPSHYML TPTRLSPRYS RGRLRGGSPF KDDDSLTSCP PFPSYMAPTV SAKAKVRPNS NPKERVMGTP SSVRSEKRRV SYPPVQRGED
401: VFRWSKGSLL MSKKGCPGSS SPGGVVAIEK RKTVKSVGNL SVDSTVSMPA TVGKKRFNRY V
001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
Arabidopsis Description
IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.