Factsheet for HORVU3Hr1G089690.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G392900.1	Wheat	cytosol	93.79	94.69
TraesCS3B01G431200.1	Wheat	cytosol	93.63	93.93
TraesCS3A01G398900.1	Wheat	cytosol	92.2	92.94
EES01898	Sorghum	cytosol	63.38	70.69
Os01t0896200-01	Rice	mitochondrion	37.42	69.73
Zm00001d012167_P001	Maize	cytosol	60.67	65.92
GSMUA_Achr7P02870_001	Banana	mitochondrion	21.97	45.85
GSMUA_Achr8P32220_001	Banana	cytosol	31.69	45.54
CDY05984	Canola	nucleus	28.82	36.57
Bra007471.1-P	Field mustard	nucleus	28.66	36.29
CDX71881	Canola	nucleus	28.5	36.23
CDY23391	Canola	cytosol	26.43	36.01
KRH50198	Soybean	cytosol	30.41	35.83
CDY30433	Canola	cytosol	25.64	35.78
KRH71267	Soybean	cytosol	30.41	35.7
AT3G59690.2	Thale cress	nucleus	28.82	35.01
VIT_05s0094g00530.t01	Wine grape	cytosol	33.12	34.78
Solyc08g014280.2.1	Tomato	cytosol	28.66	33.4
PGSC0003DMT400041427	Potato	cytosol	27.71	32.52
Bra037689.1-P	Field mustard	cytosol	25.8	30.74
CDX79809	Canola	nucleus	28.03	29.43
CDX83468	Canola	plasma membrane	25.8	29.4
CDY66694	Canola	nucleus	27.87	29.22
CDY44247	Canola	nucleus	25.32	28.6
Bra000318.1-P	Field mustard	nucleus	27.07	28.57
Bra004776.1-P	Field mustard	nucleus	28.03	28.16
Solyc06g053450.2.1	Tomato	nucleus	25.96	27.53
HORVU1Hr1G013210.1	Barley	cytosol	21.18	27.48
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	26.27	26.74
AT2G43680.1	Thale cress	nucleus	27.55	25.86
HORVU3Hr1G087500.2	Barley	cytosol	20.38	25.65
HORVU7Hr1G024060.1	Barley	plastid	6.53	23.3
HORVU1Hr1G071700.1	Barley	nucleus	17.52	21.4
HORVU7Hr1G075720.1	Barley	plasma membrane	18.47	21.25
HORVU3Hr1G066840.2	Barley	cytosol	14.33	21.13
HORVU7Hr1G023980.1	Barley	nucleus	10.99	21.1
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	19.59	21.06
HORVU5Hr1G007780.1	Barley	cytosol	13.54	19.81
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	14.33	18.18
HORVU1Hr1G079590.12	Barley	cytosol	13.22	17.73
HORVU5Hr1G092660.2	Barley	nucleus	11.94	17.12

Protein Annotations

EnsemblPlants:HORVU3Hr1G089690.1	EnsemblPlantsGene:HORVU3Hr1G089690	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	PFAM:PF00612
PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000B4800B9	UniProt:A0A287M7C0	MapMan:20.6.2

Description

No Description!

Coordinates

chrchr3H:+:629445057..629449480

Molecular Weight (calculated)

70015.5 Da

IEP (calculated)

11.890

GRAVY (calculated)

-0.868

Length

628 amino acids

Sequence
(BLAST)

001: MGKKGSGWIT ALKKAFTTNP KDKPTNVQLV AQYPQPPQQY RGSARDKKRW GFGRSRQHAD PAPLMSIPLY RQPSSIEKIL GDAEMERQYY GRPPAQYQIT
101: PAKPTTATVA ATAPTTPAVR EREREREWGR DRERDRERDA GADKQQRQQH AAVLQLPAPP SSPPPLIRRF DHDREQQQRL QRLQQGRAEM AEWRQPPPQQ
201: HMRTRARQRA VAPEQARAAA VAIQAAFRGY SARRSYRSLR GLIRLQAVVR GPSVRRQTAH AMRCMQTLVR VQSQVRASRV EAMERRNLRH GATLRDGRMW
301: RSGSQDGGMW DDSLLSRDEA DARTKRKAEA VMKRERALAY SYSHQVMKST PMAAHAILAD LQSGRNPWWW SPIDRSSHER EYPRHVEPAV SRPRPTLAVA
401: RREMSMSMMT PMSTAGHREM NTHMMMTPMS MSMSTTTAHR EMNMMTPIST TAAHRQMSMA TPMTTAANTP ARSVASAYYK QPSKPARGAR GAAPPSSHGG
501: GSVRDDESLT SCPAFGVPNY MTPTMSASAK ARARAHVLQQ QLEKERRAAE QKPRFSFGLG QSIGSWAKSP FWRGGGVGDQ SAAPSRVGTP AASTAGGGGR
601: HKHRRSVSGL SVDSTVSMPA GVGRRSFK

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.