Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004776.1-P | Field mustard | nucleus | 74.44 | 79.68 |
| CDX79809 | Canola | nucleus | 71.0 | 79.43 |
| CDY66694 | Canola | nucleus | 69.81 | 77.96 |
| CDY30433 | Canola | cytosol | 51.42 | 76.44 |
| Bra000318.1-P | Field mustard | nucleus | 67.26 | 75.63 |
| CDY44247 | Canola | nucleus | 62.33 | 75.0 |
| CDX83468 | Canola | plasma membrane | 61.14 | 74.23 |
| Bra037689.1-P | Field mustard | cytosol | 58.45 | 74.19 |
| CDY23391 | Canola | cytosol | 50.82 | 73.75 |
| AT3G59690.2 | Thale cress | nucleus | 54.26 | 70.21 |
| KRH50198 | Soybean | cytosol | 43.95 | 55.16 |
| KRH71267 | Soybean | cytosol | 43.35 | 54.21 |
| Solyc08g014280.2.1 | Tomato | cytosol | 40.06 | 49.72 |
| PGSC0003DMT400041427 | Potato | cytosol | 39.31 | 49.16 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 43.05 | 48.16 |
| Solyc06g053450.2.1 | Tomato | nucleus | 38.27 | 43.24 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 38.86 | 42.14 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 25.41 | 38.9 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 16.44 | 36.54 |
| Os01t0896200-01 | Rice | mitochondrion | 16.44 | 32.64 |
| EES01898 | Sorghum | cytosol | 27.2 | 32.33 |
| Zm00001d012167_P001 | Maize | cytosol | 26.61 | 30.8 |
| AT3G52290.1 | Thale cress | cytosol | 18.68 | 29.07 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 25.86 | 27.55 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 25.56 | 27.49 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 25.71 | 27.48 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 18.83 | 27.33 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 25.26 | 27.13 |
| AT2G33990.1 | Thale cress | cytosol | 9.72 | 24.71 |
| AT2G26180.1 | Thale cress | cytosol | 14.2 | 22.84 |
| AT4G10640.1 | Thale cress | nucleus | 14.2 | 22.46 |
| AT3G49380.1 | Thale cress | nucleus | 11.66 | 22.16 |
| AT3G22190.2 | Thale cress | cytosol | 13.75 | 21.8 |
| AT3G09710.2 | Thale cress | nucleus | 15.25 | 21.79 |
| AT3G15050.1 | Thale cress | plastid | 8.37 | 21.62 |
| AT3G49260.3 | Thale cress | nucleus | 15.25 | 21.61 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 17.19 | 21.54 |
| AT2G26410.2 | Thale cress | cytosol | 16.89 | 21.44 |
| AT1G01110.2 | Thale cress | nucleus | 16.29 | 20.68 |
| AT1G17480.1 | Thale cress | cytosol | 11.36 | 20.49 |
| AT1G72670.1 | Thale cress | cytosol | 12.26 | 19.81 |
Protein Annotations
| MapMan:20.6.2 | EntrezGene:818970 | UniProt:A0A178VRE6 | ProteinID:AEC10306.1 | ArrayExpress:AT2G43680 | EnsemblPlantsGene:AT2G43680 |
| RefSeq:AT2G43680 | TAIR:AT2G43680 | RefSeq:AT2G43680-TAIR-G | EnsemblPlants:AT2G43680.1 | TAIR:AT2G43680.1 | Unigene:At.24712 |
| UniProt:B3H4F6 | InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000048 | Symbol:IQD14 | InterPro:IQ_motif_EF-hand-BS |
| RefSeq:NP_850399.2 | ProteinID:OAP07715.1 | PFAM:PF00612 | PFAM:PF13178 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50096 |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 | SMART:SM00015 | UniParc:UPI000034EE81 | SEG:seg | : |
Description
IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
Coordinates
chr2:+:18108119..18111831
Molecular Weight (calculated)
74414.3 Da
IEP (calculated)
11.873
GRAVY (calculated)
-1.029
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKGSWFSA IKRVFTPHSK EKLANQEPER KSGKEKKKKG FGKLRHGETN SFLPIFREPS SIEKILGEAE RDHNLVFRPP TPDRPNPYSA SPPPRPASPR
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.