Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71881 | Canola | nucleus | 84.91 | 88.87 |
| Bra007471.1-P | Field mustard | nucleus | 85.11 | 88.71 |
| CDY05984 | Canola | nucleus | 84.72 | 88.48 |
| AT2G43680.1 | Thale cress | nucleus | 70.21 | 54.26 |
| KRH50198 | Soybean | cytosol | 55.9 | 54.22 |
| KRH71267 | Soybean | cytosol | 55.32 | 53.46 |
| Solyc08g014280.2.1 | Tomato | cytosol | 52.42 | 50.28 |
| PGSC0003DMT400041427 | Potato | cytosol | 51.64 | 49.91 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 55.9 | 48.33 |
| Solyc06g053450.2.1 | Tomato | nucleus | 47.58 | 41.55 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 34.04 | 40.27 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 47.39 | 39.71 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 22.82 | 39.2 |
| Os01t0896200-01 | Rice | mitochondrion | 23.6 | 36.2 |
| EES01898 | Sorghum | cytosol | 35.78 | 32.86 |
| Zm00001d012167_P001 | Maize | cytosol | 35.2 | 31.49 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 35.01 | 29.1 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 35.2 | 29.07 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 35.01 | 29.05 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 35.01 | 28.82 |
| AT3G52290.1 | Thale cress | cytosol | 23.6 | 28.37 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 24.18 | 27.11 |
| AT2G33990.1 | Thale cress | cytosol | 12.77 | 25.1 |
| AT4G10640.1 | Thale cress | nucleus | 19.15 | 23.4 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 23.6 | 22.85 |
| AT3G15050.1 | Thale cress | plastid | 11.41 | 22.78 |
| AT3G22190.2 | Thale cress | cytosol | 18.57 | 22.75 |
| AT3G49380.1 | Thale cress | nucleus | 15.47 | 22.73 |
| AT2G26180.1 | Thale cress | cytosol | 17.99 | 22.36 |
| AT3G49260.3 | Thale cress | nucleus | 19.92 | 21.82 |
| AT1G17480.1 | Thale cress | cytosol | 15.47 | 21.56 |
| AT1G01110.2 | Thale cress | nucleus | 21.86 | 21.44 |
| AT3G09710.2 | Thale cress | nucleus | 19.15 | 21.15 |
| AT2G26410.2 | Thale cress | cytosol | 21.28 | 20.87 |
| AT1G72670.1 | Thale cress | cytosol | 16.25 | 20.29 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:20.6.2 | EntrezGene:825138 | ProteinID:AEE79956.1 | ProteinID:ANM64846.1 | ArrayExpress:AT3G59690 |
| EnsemblPlantsGene:AT3G59690 | RefSeq:AT3G59690 | TAIR:AT3G59690 | RefSeq:AT3G59690-TAIR-G | EnsemblPlants:AT3G59690.2 | EMBL:AY128329 |
| Unigene:At.34589 | EMBL:BT001176 | ProteinID:CAB75466.1 | InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000048 |
| Symbol:IQD13 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_001326850.1 | RefSeq:NP_191528.1 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 | UniProt:Q9M199 | SMART:SM00015 | UniParc:UPI00000AC1F7 |
| SEG:seg | : | : | : | : | : |
Description
IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
Coordinates
chr3:+:22048557..22051479
Molecular Weight (calculated)
58508.6 Da
IEP (calculated)
11.516
GRAVY (calculated)
-0.916
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.