Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007471.1-P | Field mustard | nucleus | 98.38 | 98.19 |
| CDX71881 | Canola | nucleus | 95.15 | 95.34 |
| AT3G59690.2 | Thale cress | nucleus | 88.48 | 84.72 |
| CDY30433 | Canola | cytosol | 57.98 | 63.78 |
| CDY23391 | Canola | cytosol | 56.77 | 60.95 |
| CDX79809 | Canola | nucleus | 66.46 | 55.02 |
| CDY66694 | Canola | nucleus | 66.46 | 54.92 |
| CDX83468 | Canola | plasma membrane | 60.4 | 54.27 |
| KRH50198 | Soybean | cytosol | 58.38 | 54.22 |
| CDY44247 | Canola | nucleus | 60.4 | 53.78 |
| KRH71267 | Soybean | cytosol | 57.37 | 53.08 |
| Solyc08g014280.2.1 | Tomato | cytosol | 54.95 | 50.46 |
| PGSC0003DMT400041427 | Potato | cytosol | 54.34 | 50.28 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 58.59 | 48.49 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 36.77 | 41.65 |
| Solyc06g053450.2.1 | Tomato | nucleus | 49.09 | 41.05 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 24.44 | 40.2 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 49.7 | 39.87 |
| Os01t0896200-01 | Rice | mitochondrion | 23.64 | 34.72 |
| EES01898 | Sorghum | cytosol | 37.17 | 32.68 |
| Zm00001d012167_P001 | Maize | cytosol | 37.17 | 31.83 |
| CDY11238 | Canola | cytosol, plastid | 24.24 | 29.06 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 36.36 | 28.94 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 36.57 | 28.91 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 36.36 | 28.89 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 36.57 | 28.82 |
| CDX80849 | Canola | cytosol, plastid | 24.65 | 28.64 |
| CDY04876 | Canola | nucleus, plastid | 24.85 | 27.64 |
| CDY17214 | Canola | cytosol, plastid | 14.75 | 27.55 |
| CDY55696 | Canola | nucleus, plastid | 24.24 | 27.46 |
| CDY27925 | Canola | plastid | 14.55 | 27.17 |
| CDY10410 | Canola | cytosol, plastid | 24.04 | 26.8 |
| CDX95328 | Canola | cytosol | 23.43 | 26.07 |
| CDY23202 | Canola | cytosol | 23.43 | 26.07 |
| CDX96427 | Canola | cytosol | 12.73 | 25.93 |
| CDY62768 | Canola | cytosol | 14.14 | 25.27 |
| CDY32322 | Canola | cytosol, plastid | 13.13 | 25.1 |
| CDX72935 | Canola | cytosol | 13.33 | 25.1 |
| CDX70333 | Canola | cytosol | 24.04 | 24.79 |
| CDY20099 | Canola | cytosol | 13.13 | 24.62 |
| CDX92933 | Canola | cytosol, plastid | 19.39 | 23.94 |
| CDY24286 | Canola | cytosol | 19.39 | 23.76 |
| CDY10618 | Canola | cytosol | 19.19 | 23.4 |
| CDY05111 | Canola | nucleus | 20.2 | 23.31 |
| CDY38525 | Canola | cytosol | 19.39 | 23.24 |
| CDX90011 | Canola | nucleus | 23.84 | 23.23 |
| CDY15200 | Canola | nucleus | 23.84 | 23.09 |
| CDX90766 | Canola | nucleus | 20.0 | 22.97 |
| CDY08131 | Canola | nucleus | 15.96 | 22.97 |
| CDY05931 | Canola | nucleus | 16.16 | 22.73 |
| CDY37387 | Canola | cytosol | 17.58 | 22.66 |
| CDX77034 | Canola | cytosol | 17.58 | 21.97 |
| CDY35313 | Canola | nucleus | 17.58 | 21.91 |
| CDX86983 | Canola | nucleus | 21.01 | 21.89 |
| CDX91859 | Canola | mitochondrion, nucleus | 23.23 | 21.7 |
| CDY00196 | Canola | nucleus | 20.81 | 21.68 |
| CDY69140 | Canola | mitochondrion, nucleus | 22.63 | 21.33 |
| CDY48305 | Canola | nucleus | 15.96 | 21.07 |
| CDY26241 | Canola | nucleus | 15.96 | 21.07 |
| CDY05917 | Canola | mitochondrion, nucleus | 20.2 | 21.05 |
| CDX83237 | Canola | cytosol | 21.01 | 20.51 |
| CDY39505 | Canola | cytosol | 16.36 | 20.51 |
| CDY08120 | Canola | mitochondrion, nucleus | 19.6 | 20.46 |
| CDX92931 | Canola | mitochondrion, nucleus | 9.9 | 19.22 |
| CDY58749 | Canola | cytosol | 17.58 | 19.08 |
| CDY41307 | Canola | cytosol | 20.4 | 18.46 |
| CDX73992 | Canola | nucleus | 17.17 | 17.82 |
| CDY07937 | Canola | nucleus | 17.17 | 17.78 |
| CDY22198 | Canola | cytosol | 20.0 | 17.71 |
| CDX96426 | Canola | nucleus, plastid | 3.64 | 17.65 |
| CDX72934 | Canola | nucleus, plastid | 3.64 | 17.65 |
| CDY05918 | Canola | mitochondrion | 10.91 | 17.2 |
| CDY24282 | Canola | mitochondrion | 9.49 | 15.41 |
Protein Annotations
| EnsemblPlants:CDY05984 | EnsemblPlantsGene:GSBRNA2T00121823001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY05984 | ProteinID:CDY05984.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI0004EE1CBC | MapMan:20.6.2 | : | : | : |
Description
BnaA09g37960D
Coordinates
chrLK031967:-:87925..90739
Molecular Weight (calculated)
56019.8 Da
IEP (calculated)
11.670
GRAVY (calculated)
-0.964
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSWFSA IKRVFTPHSK EKQLSNNQEQ ERKSNNKKEK KKKSLGKKLR DGETNSFLPI FRQPSSIEKI LCEAEREHNL VFRPPTPTDR ANSVPSPHIR
101: PPSPKVSSQR YVSSPRPVSP RVASPRALSP KPPSPRAASP RIVQRREYVR RPEPTLLVKK ASATKIQAAF RGYMARRSFR ALKGLVRLQG VVRGHSVKRQ
201: TMNAMKYMQL LVRVQTQVQS RRIQMLEHRA RNEKDDPKLA SSLASDDWDD SVLTKEEKEA RLHRKIDAMI KRERSMAYAY SHQLWKNSPR SAQDIRTNGI
301: PLWWNWVDRQ NNQTQPFRLT PTRPSPSPQP HSSNKNHSRL NNSFDVSTPN SSKSAFLTPS RPIHTPQPSR YSRGGRATQD SPFKDDDSLT SCPPFSAPSY
401: MAPTVSAKAK LRANSNPKER VDGTTPEKRR SSFPLGSFKW NKGALFMSNN NKGSPSSGAV VLEKHKTLKS VGNMSIDSTV SMPATIGKRS FNRFA
101: PPSPKVSSQR YVSSPRPVSP RVASPRALSP KPPSPRAASP RIVQRREYVR RPEPTLLVKK ASATKIQAAF RGYMARRSFR ALKGLVRLQG VVRGHSVKRQ
201: TMNAMKYMQL LVRVQTQVQS RRIQMLEHRA RNEKDDPKLA SSLASDDWDD SVLTKEEKEA RLHRKIDAMI KRERSMAYAY SHQLWKNSPR SAQDIRTNGI
301: PLWWNWVDRQ NNQTQPFRLT PTRPSPSPQP HSSNKNHSRL NNSFDVSTPN SSKSAFLTPS RPIHTPQPSR YSRGGRATQD SPFKDDDSLT SCPPFSAPSY
401: MAPTVSAKAK LRANSNPKER VDGTTPEKRR SSFPLGSFKW NKGALFMSNN NKGSPSSGAV VLEKHKTLKS VGNMSIDSTV SMPATIGKRS FNRFA
001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
Arabidopsis Description
IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.