Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005462.1-P | Field mustard | cytosol, plastid | 97.36 | 97.36 |
| CDY17214 | Canola | cytosol, plastid | 97.36 | 97.36 |
| CDY62768 | Canola | cytosol | 83.4 | 79.78 |
| AT2G33990.1 | Thale cress | cytosol | 76.98 | 77.57 |
| CDY32322 | Canola | cytosol, plastid | 46.04 | 47.1 |
| CDY20099 | Canola | cytosol | 46.42 | 46.59 |
| CDY37387 | Canola | cytosol | 34.72 | 23.96 |
| CDX96427 | Canola | cytosol | 21.89 | 23.87 |
| CDX77034 | Canola | cytosol | 34.34 | 22.98 |
| CDY35313 | Canola | nucleus | 34.34 | 22.92 |
| CDX92933 | Canola | cytosol, plastid | 34.34 | 22.69 |
| CDY10618 | Canola | cytosol | 34.72 | 22.66 |
| CDY24286 | Canola | cytosol | 34.34 | 22.52 |
| CDY11238 | Canola | cytosol, plastid | 35.09 | 22.52 |
| CDX72935 | Canola | cytosol | 22.26 | 22.43 |
| CDX80849 | Canola | cytosol, plastid | 34.34 | 21.36 |
| CDY58749 | Canola | cytosol | 35.47 | 20.61 |
| CDY10410 | Canola | cytosol, plastid | 33.58 | 20.05 |
| CDY04876 | Canola | nucleus, plastid | 33.21 | 19.78 |
| CDY55696 | Canola | nucleus, plastid | 32.45 | 19.68 |
| CDY39505 | Canola | cytosol | 29.06 | 19.49 |
| CDX92931 | Canola | mitochondrion, nucleus | 18.49 | 19.22 |
| CDX70333 | Canola | cytosol | 33.96 | 18.75 |
| CDX95328 | Canola | cytosol | 30.94 | 18.43 |
| CDY23202 | Canola | cytosol | 30.19 | 17.98 |
| CDY38525 | Canola | cytosol | 27.92 | 17.92 |
| CDY24282 | Canola | mitochondrion | 19.62 | 17.05 |
| CDY48305 | Canola | nucleus | 23.77 | 16.8 |
| CDY26241 | Canola | nucleus | 23.77 | 16.8 |
| CDX73992 | Canola | nucleus | 27.17 | 15.09 |
| CDY41307 | Canola | cytosol | 30.94 | 14.99 |
| CDX83237 | Canola | cytosol | 28.68 | 14.99 |
| CDY05111 | Canola | nucleus | 24.15 | 14.92 |
| CDY07937 | Canola | nucleus | 26.79 | 14.85 |
| CDX90766 | Canola | nucleus | 24.15 | 14.85 |
| CDY05984 | Canola | nucleus | 27.17 | 14.55 |
| CDY22198 | Canola | cytosol | 30.19 | 14.31 |
| CDX71881 | Canola | nucleus | 26.42 | 14.17 |
| CDY05917 | Canola | mitochondrion, nucleus | 25.28 | 14.11 |
| CDY15200 | Canola | nucleus | 27.17 | 14.09 |
| CDY30433 | Canola | cytosol | 23.77 | 14.0 |
| CDY08120 | Canola | mitochondrion, nucleus | 24.91 | 13.92 |
| CDX90011 | Canola | nucleus | 26.42 | 13.78 |
| CDY08131 | Canola | nucleus | 17.74 | 13.66 |
| CDY00196 | Canola | nucleus | 24.15 | 13.47 |
| CDX86983 | Canola | nucleus | 24.15 | 13.47 |
| CDY05931 | Canola | nucleus | 17.74 | 13.35 |
| CDY23391 | Canola | cytosol | 22.64 | 13.02 |
| CDY69140 | Canola | mitochondrion, nucleus | 24.15 | 12.19 |
| CDX91859 | Canola | mitochondrion, nucleus | 23.77 | 11.89 |
| CDY66694 | Canola | nucleus | 26.79 | 11.85 |
| CDX79809 | Canola | nucleus | 26.42 | 11.71 |
| CDX83468 | Canola | plasma membrane | 24.15 | 11.62 |
| CDY44247 | Canola | nucleus | 24.15 | 11.51 |
| CDY05918 | Canola | mitochondrion | 13.58 | 11.46 |
| CDX72934 | Canola | nucleus, plastid | 1.13 | 2.94 |
| CDX96426 | Canola | nucleus, plastid | 1.13 | 2.94 |
Protein Annotations
| EnsemblPlants:CDY27925 | EnsemblPlantsGene:GSBRNA2T00038821001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF9 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY27925 |
| ProteinID:CDY27925.1 | SEG:seg | UniParc:UPI0004EEDE8A | UniProt:A0A078GMW1 | MapMan:35.1 | : |
Description
BnaCnng05100DBnaCnng05100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMW1]
Coordinates
chrLK032212:+:219050..221278
Molecular Weight (calculated)
29939.3 Da
IEP (calculated)
11.389
GRAVY (calculated)
-0.746
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGNFFKAI IGSKKGKQTK GLSTAVKSKA SKKKGTHASS LVVRSEDWAA TRIQSAFRAY KARKMLRRLK GIARAKELTE KHPVKKQAAV TLKYLHSWSK
101: IQSQIKARRV GMVMESRLMH KRLENQQKLE AKLHDIEVEW NGGAETKDEI LGRIHQREEA TIKRERALAY AFAHQWKAEG KTQWLGGYEL GNTNWGWSWK
201: ERWIAVRPWE VRHSLTPKKP RSLKTVCCKS ETKSNSPAKR VTSVSAKAPA SGAAVKPRRL SFPGA
101: IQSQIKARRV GMVMESRLMH KRLENQQKLE AKLHDIEVEW NGGAETKDEI LGRIHQREEA TIKRERALAY AFAHQWKAEG KTQWLGGYEL GNTNWGWSWK
201: ERWIAVRPWE VRHSLTPKKP RSLKTVCCKS ETKSNSPAKR VTSVSAKAPA SGAAVKPRRL SFPGA
001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
Arabidopsis Description
iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.