Factsheet for Bra005462.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17214	Canola	cytosol, plastid	98.49	98.49
CDY27925	Canola	plastid	97.36	97.36
AT2G33990.1	Thale cress	cytosol	78.87	79.47
Bra021888.1-P	Field mustard	plastid	69.06	70.66
Bra021588.1-P	Field mustard	cytosol, plastid	47.17	47.35
Bra031331.1-P	Field mustard	cytosol	34.72	23.96
Bra034294.1-P	Field mustard	nucleus	33.96	22.67
Bra028854.1-P	Field mustard	nucleus, plastid	32.83	19.55
Bra001855.1-P	Field mustard	cytosol	24.91	19.24
Bra009554.1-P	Field mustard	cytosol	33.58	18.9
Bra034081.1-P	Field mustard	nucleus	31.32	18.69
Bra023846.1-P	Field mustard	cytosol	29.06	18.47
Bra033443.1-P	Field mustard	cytosol	30.57	18.2
Bra016042.1-P	Field mustard	cytosol	27.55	17.72
Bra025971.1-P	Field mustard	nucleus	23.77	16.8
Bra001299.1-P	Field mustard	nucleus	27.55	15.43
Bra000717.1-P	Field mustard	nucleus	24.91	15.28
Bra007471.1-P	Field mustard	nucleus	27.55	14.72
Bra017997.1-P	Field mustard	nucleus, plastid	24.91	13.89
Bra033284.1-P	Field mustard	nucleus	26.79	13.5
Bra017988.1-P	Field mustard	nucleus	17.74	13.43
Bra019589.1-P	Field mustard	nucleus	23.77	13.26
Bra037689.1-P	Field mustard	cytosol	24.53	12.33
Bra000930.1-P	Field mustard	mitochondrion, nucleus	23.77	12.0
Bra000318.1-P	Field mustard	nucleus	26.04	11.6
Bra004776.1-P	Field mustard	nucleus	26.79	11.36

Protein Annotations

EnsemblPlants:Bra005462.1	EnsemblPlants:Bra005462.1-P	EnsemblPlantsGene:Bra005462	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF9	PFAM:PF00612	PFscan:PS50096
SEG:seg	UniParc:UPI0002547300	UniProt:M4CMM4	MapMan:35.1	:	:

Description

AT2G33990 (E=3e-103) iqd9 | iqd9 (IQ-domain 9); calmodulin binding

Coordinates

chrA05:+:5608715..5609850

Molecular Weight (calculated)

29955.3 Da

IEP (calculated)

11.297

GRAVY (calculated)

-0.757

Length

265 amino acids

Sequence
(BLAST)

001: MGSGNFFKAI IGSKKGKQTK GLSTAVKSKA SKKKGTHASS LVIRSEDWAA TRIQSAFRAY KARKMLRRLK GIARAKELTE KHPVKKQAAV TLKYLHSWSK
101: IQSQIKARRV GMVMESRLMH KRLENQQKLE AKLHDVEVEW NGGAETKDEI LGRIHQREEA TIKRERALAY AFSHQWKAEG KTQWLGGYEL GNTNWGWSWK
201: ERWIAVRPWE VRYSLTPKKP KSLKTVCCKS ETKSNSPAKR VSSVSAKAPS SGAAVKPRRL SFPGA

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.