Factsheet for Bra033443.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23202	Canola	cytosol	99.33	99.33
CDX95328	Canola	cytosol	97.75	97.75
AT3G52290.1	Thale cress	cytosol	79.33	82.09
KRH57858	Soybean	cytosol	50.11	49.12
KRH04761	Soybean	cytosol	51.24	47.2
Bra028854.1-P	Field mustard	nucleus, plastid	42.47	42.47
KRG91856	Soybean	cytosol	45.39	41.31
KRH34906	Soybean	cytosol	44.72	41.2
Bra009554.1-P	Field mustard	cytosol	41.8	39.49
Bra034081.1-P	Field mustard	nucleus	34.16	34.23
Bra001299.1-P	Field mustard	nucleus	32.58	30.66
Bra005462.1-P	Field mustard	cytosol, plastid	18.2	30.57
Bra031331.1-P	Field mustard	cytosol	25.39	29.43
Bra034294.1-P	Field mustard	nucleus	24.27	27.2
Bra021888.1-P	Field mustard	plastid	15.73	27.03
Bra001855.1-P	Field mustard	cytosol	20.22	26.24
Bra021588.1-P	Field mustard	cytosol, plastid	15.28	25.76
Bra017997.1-P	Field mustard	nucleus, plastid	27.19	25.47
Bra017988.1-P	Field mustard	nucleus	19.55	24.86
Bra019589.1-P	Field mustard	nucleus	26.07	24.42
Bra033284.1-P	Field mustard	nucleus	28.76	24.33
Bra000717.1-P	Field mustard	nucleus	23.6	24.31
Bra007471.1-P	Field mustard	nucleus	26.74	23.99
Bra016042.1-P	Field mustard	cytosol	20.67	22.33
Bra000930.1-P	Field mustard	mitochondrion, nucleus	25.84	21.9
Bra025971.1-P	Field mustard	nucleus	17.98	21.33
Bra023846.1-P	Field mustard	cytosol	19.78	21.1
Bra037689.1-P	Field mustard	cytosol	23.82	20.11
Bra000318.1-P	Field mustard	nucleus	26.52	19.83
Bra004776.1-P	Field mustard	nucleus	25.17	17.92

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra033443	EnsemblPlants:Bra033443.1	EnsemblPlants:Bra033443.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005886	GO:GO:0016020	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4EXA7
PFAM:PF00612	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28	SMART:SM00015	UniParc:UPI000254384F
SEG:seg	:	:	:	:	:

Description

AT3G52290 (E=2e-147) IQD3 | IQD3 (IQ-domain 3); calmodulin binding

Coordinates

chrA04:-:4233882..4235546

Molecular Weight (calculated)

49052.3 Da

IEP (calculated)

11.401

GRAVY (calculated)

-0.771

Length

445 amino acids

Sequence
(BLAST)

001: MGKSWFAVVK KAFTPRPKQT KDEQKPHKAK KWFGKSKKLD VTTPGVAGSL PSNTLCVARE AKLKEIEEEQ SRHAYSVAVA TAAAADAAVA AAQAAAEVVR
101: LTAVSRFPGK SKEDIAAIKI QTAFRGYMAR RALRALRGLV RLKSLVQGKG VRRQATSTLQ SMQTLARLQY QIRERRLRLS EDKQACARKL QQKHNKDFAK
201: IGGNWDDSTL SRERVEANML NKQVATMRRE KALAYAYTHQ NTWKGSSISQ TFMDPNNPHW GWSWLERWMA ARPNENQSVT LTPDTADKTS SAANSVASRA
301: RSEIIPRGRK PSPKRITPPS SRRMSSPGVR QVPSGDEDSK SRLSIQSEQP GNRRHSIGGS LPSTRDDESS ITSSSVSQSV PGYMALTQAA KARARLSNLS
401: PLGSEKTAKK RLSFSDSPNK TVRRFSGPPK LESSGNNKNK DSVLA

Best Arabidopsis Sequence Match ( AT3G52290.1 )
(BLAST)

001: MGKSWFSAVK KALSPEPKQK KEQKPHKSKK WFGKSKKLDV TNSGAAYSPR TVKDAKLKEI EEQQSRHAYS VAIATAAAAE AAVAAAQAAA EVVRLSALSR
101: FPGKSMEEIA AIKIQTAFRG YMARRALRAL RGLVRLKSLV QGKCVRRQAT STLQSMQTLA RVQYQIRERR LRLSEDKQAL TRQLQQKHNK DFDKTGENWN
201: DSTLSREKVE ANMLNKQVAT MRREKALAYA FSHQNTWKNS TKMGSQTFMD PNNPHWGWSW LERWMAARPN ENHSLTPDNA EKDSSARSVA SRAMSEMIPR
301: GKNLSPRGKT PNSRRGSSPR VRQVPSEDSN SIVSFQSEQP CNRRHSTCGS IPSTRDDESF TSSFSQSVPG YMAPTQAAKA RARFSNLSPL SSEKTAKKRL
401: SFSGSPKTVR RFSGPPKLES NVTKKDTNLA

Arabidopsis Description

IQD3IQD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VCT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.