CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91856	Soybean	cytosol	90.89	89.78
KRH57858	Soybean	cytosol	51.76	55.07
KRH04761	Soybean	cytosol	52.17	52.17
AT3G52290.1	Thale cress	cytosol	40.17	45.12
Bra033443.1-P	Field mustard	cytosol	41.2	44.72
CDX95328	Canola	cytosol	41.2	44.72
CDY23202	Canola	cytosol	40.99	44.49
KRG95941	Soybean	nucleus	43.89	44.44
KRH67648	Soybean	nucleus	43.69	44.23
KRH19825	Soybean	cytosol	41.2	42.34
KRH32420	Soybean	cytosol	40.79	41.56
KRH32840	Soybean	mitochondrion, nucleus	8.28	30.3
KRH21320	Soybean	cytosol	18.01	29.1
KRH50151	Soybean	cytosol	17.39	28.97
KRH20344	Soybean	cytosol	17.6	28.62
KRH05433	Soybean	cytosol	24.22	28.33
KRH27315	Soybean	cytosol	17.18	28.23
KRH15576	Soybean	cytosol	24.22	28.06
KRH10977	Soybean	cytosol	17.81	27.92
KRH22612	Soybean	cytosol	23.81	27.06
KRH26707	Soybean	cytosol	23.6	27.01
KRH71267	Soybean	cytosol	29.19	26.36
KRH39086	Soybean	cytosol	23.6	26.27
KRH55128	Soybean	mitochondrion, nucleus	15.73	25.68
KRH61522	Soybean	cytosol	23.81	25.56
KRH37691	Soybean	mitochondrion	9.52	25.41
KRH50198	Soybean	cytosol	27.95	25.33
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	24.02	25.33
KRH52206	Soybean	cytosol	23.4	25.11
KRH64435	Soybean	nucleus	23.6	24.62
KRH53505	Soybean	cytosol	22.57	24.44
KRH22000	Soybean	plastid	17.18	24.2
KRH47821	Soybean	nucleus	25.67	22.71
KRH23285	Soybean	nucleus	19.25	22.57
KRH06386	Soybean	mitochondrion, nucleus	25.67	22.55
KRH10035	Soybean	cytosol	19.25	22.36
KRH44124	Soybean	mitochondrion	18.43	21.14
KRH47099	Soybean	cytosol	18.22	19.09

Protein Annotations

EMBL:ACUP02006642	EnsemblPlants:KRH34906	EnsemblPlantsGene:GLYMA_10G213100	EntrezGene:100807307	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28
PFAM:PF00612	PFscan:PS50096	ProteinID:KRH34906	ProteinID:KRH34906.1	SEG:seg	UniParc:UPI00023CD14B
UniProt:K7LKN6	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:44555062..44558544

Molecular Weight (calculated)

52993.4 Da

IEP (calculated)

11.274

GRAVY (calculated)

-0.848

Length

483 amino acids

Sequence
(BLAST)

001: MGRKGGWFSA VKRVFVSYSK KEQKQHHHKS KLGCFGTHHY EDLEGAPIAA VPSLPPRKDP KPISEAENNE QSKQAFSLVL ATAVAAGAAV AAAAAEVTRL
101: TNTPRSNGKA NQEMTAIKIQ TAYRGYSARK SLRGLRGLSR LKTLVQGQSV QRQAATTLQC MQTLSRLQSQ VRARKVRMSE ENQSLQRQLQ QKREKEFDKS
201: QANQIGEKWD DSLKSKEQVE AKLLNRQVAA MRREKALAYA STHQQTWRNS SKSATNATFM DPNNPHWGWN WLERWMAARP WEGQNTTYHI GHASAKSVAS
301: QTMSVGEITK LYSLRDQNND IKTSPANQKP TRPCSHNSPS TTPSKVPLAN GAKTKVLSSS RGGSWGGDGD SKSMFSKNLE NTRRHSIGVS QVRDDESNSS
401: SSPSTKVATK VKSSSSSSKV RSASFGVHRN GTPEKATSAP LKKRLSSPAS PAGIRRYAVS TRPGNVASNK SVANAIPSLM RRK

Best Arabidopsis Sequence Match ( AT3G09710.1 )
(BLAST)

001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP

Arabidopsis Description

IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.