Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | KRG93305 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRH56614 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19825 | Soybean | cytosol | 92.19 | 92.98 |
| KRG95941 | Soybean | nucleus | 72.78 | 72.33 |
| KRH67648 | Soybean | nucleus | 71.52 | 71.07 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 61.39 | 60.75 |
| PGSC0003DMT400004433 | Potato | cytosol | 60.55 | 59.79 |
| Solyc09g007410.2.1 | Tomato | cytosol | 60.13 | 59.01 |
| Solyc10g084280.1.1 | Tomato | nucleus | 57.38 | 56.9 |
| PGSC0003DMT400027139 | Potato | cytosol | 57.38 | 56.55 |
| PGSC0003DMT400045333 | Potato | cytosol | 56.12 | 56.48 |
| Solyc10g086060.1.1 | Tomato | cytosol | 55.49 | 55.84 |
| CDY11238 | Canola | cytosol, plastid | 46.41 | 53.27 |
| Os05t0123200-01 | Rice | plasma membrane | 51.9 | 51.9 |
| CDX80849 | Canola | cytosol, plastid | 46.62 | 51.88 |
| KRH57858 | Soybean | cytosol | 49.58 | 51.76 |
| CDY55696 | Canola | nucleus, plastid | 47.68 | 51.72 |
| KXG21175 | Sorghum | cytosol | 51.48 | 51.59 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 51.9 | 51.46 |
| GSMUA_Achr10P... | Banana | nucleus | 48.73 | 51.33 |
| CDY04876 | Canola | nucleus, plastid | 48.1 | 51.24 |
| Zm00001d035492_P009 | Maize | cytosol | 51.27 | 51.05 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 47.89 | 51.01 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 49.37 | 50.76 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 51.05 | 50.42 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 51.48 | 50.41 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 50.84 | 50.21 |
| Zm00001d010975_P003 | Maize | cytosol | 50.42 | 50.0 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 50.42 | 50.0 |
| KRH04761 | Soybean | cytosol | 49.79 | 48.86 |
| CDY10410 | Canola | cytosol, plastid | 45.57 | 48.65 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 47.05 | 47.96 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 45.36 | 46.84 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 45.57 | 45.76 |
| Bra009554.1-P | Field mustard | cytosol | 44.73 | 45.01 |
| CDX70333 | Canola | cytosol | 45.57 | 45.0 |
| Os01t0833800-01 | Rice | plasma membrane | 46.62 | 44.2 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 46.2 | 43.89 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 46.2 | 43.89 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 46.2 | 43.89 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 46.2 | 43.89 |
| GSMUA_Achr10P... | Banana | cytosol | 39.03 | 43.84 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 45.78 | 43.75 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.98 | 43.07 |
| AT3G09710.2 | Thale cress | nucleus | 42.41 | 42.95 |
| KXG33651 | Sorghum | cytosol | 44.94 | 42.77 |
| Zm00001d042973_P007 | Maize | cytosol | 44.73 | 41.81 |
| KRG91856 | Soybean | cytosol | 42.41 | 41.1 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 45.57 | 41.06 |
| KRH34906 | Soybean | cytosol | 41.56 | 40.79 |
| Bra034081.1-P | Field mustard | nucleus | 37.97 | 40.54 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 44.94 | 40.11 |
| Bra001299.1-P | Field mustard | nucleus | 38.19 | 38.27 |
| CDX73992 | Canola | nucleus | 37.13 | 36.9 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 45.36 | 36.82 |
| CDY07937 | Canola | nucleus | 36.29 | 35.98 |
| CDY22198 | Canola | cytosol | 39.45 | 33.45 |
| KRH50151 | Soybean | cytosol | 20.46 | 33.45 |
| CDY41307 | Canola | cytosol | 38.4 | 33.27 |
| KRH20344 | Soybean | cytosol | 20.46 | 32.66 |
| KRH21320 | Soybean | cytosol | 20.25 | 32.11 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 34.39 | 31.29 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 34.81 | 31.19 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 33.54 | 30.93 |
| KRH10977 | Soybean | cytosol | 20.04 | 30.84 |
| Os05t0463300-00 | Rice | plasma membrane | 31.65 | 29.88 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 33.12 | 29.73 |
| KRH32840 | Soybean | mitochondrion, nucleus | 8.23 | 29.55 |
| OQU78148 | Sorghum | cytosol | 34.18 | 28.93 |
| KRH27315 | Soybean | cytosol | 17.93 | 28.91 |
| KRH26707 | Soybean | cytosol | 25.74 | 28.91 |
| KRH05433 | Soybean | cytosol | 25.11 | 28.81 |
| KRH15576 | Soybean | cytosol | 25.32 | 28.78 |
| KRH55128 | Soybean | mitochondrion, nucleus | 17.93 | 28.72 |
| KRH22612 | Soybean | cytosol | 25.53 | 28.47 |
| KRH50198 | Soybean | cytosol | 31.43 | 27.95 |
| KRH53505 | Soybean | cytosol | 26.16 | 27.8 |
| KRH71267 | Soybean | cytosol | 31.01 | 27.48 |
| KRH64435 | Soybean | nucleus | 26.79 | 27.43 |
| KRH39086 | Soybean | cytosol | 24.89 | 27.19 |
| KRH61522 | Soybean | cytosol | 25.32 | 26.67 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 25.74 | 26.64 |
| KRH52206 | Soybean | cytosol | 25.11 | 26.44 |
| KRH22000 | Soybean | plastid | 18.35 | 25.36 |
| KRH23285 | Soybean | nucleus | 21.94 | 25.24 |
| KRH47821 | Soybean | nucleus | 28.9 | 25.09 |
| KRH06386 | Soybean | mitochondrion, nucleus | 29.11 | 25.09 |
| KRH10035 | Soybean | cytosol | 21.94 | 25.0 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.49 | 23.69 |
| KRH37691 | Soybean | mitochondrion | 8.86 | 23.2 |
| KRH44124 | Soybean | mitochondrion | 19.41 | 21.85 |
| KRH47099 | Soybean | cytosol | 20.04 | 20.61 |
Protein Annotations
| EMBL:ACUP02006116 | EnsemblPlants:KRH32420 | EnsemblPlantsGene:GLYMA_10G050000 | EntrezGene:100801847 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 |
| PFscan:PS50096 | ProteinID:KRH32419.1 | ProteinID:KRH32420 | ProteinID:KRH32420.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI000233C386 | UniProt:I1L8S7 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4494375..4498311
Molecular Weight (calculated)
52822.5 Da
IEP (calculated)
10.730
GRAVY (calculated)
-0.819
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKGNSWFS TVKKALSPEP KEKNDQNSSR SKKKWFQKQK LQTSESTSQS DNAPPLPLPE IILTHVESEI NHDRVEVATA VDAEEPVLAV QTAAAEVQAT
101: TIVQFDNKPT EEMAAIRIQK AFRGYLARRA LRALRGLVRL RSLMEGPVVK RQAISTLRSM QTFAHLQTQI RSRRLRMLEE NQALQKQLLQ KHAKELESMR
201: LGEEWDDSVQ SKEQVEAKLL SKYEASMRRE RAMAYSFSHQ HNWKNASRSI NPMFMDPTNP AWGWSWLERW TAARPWESHS QMEKEKNGNK SLRSSSRGIT
301: SAEISKAFAK FQLNSEKHSP TASQNPGSPN FESHSQSHSN PPKPPSPAVA KKLKKASPKD ILAIDDDTKS MISVQSERPR RHSIAGSIVG DDESLASSPS
401: IPSYMVPTKS AKAKSRMQSP LAAEYGTPEK GSSGTAKKRL SFPASPARPR RHSGPPKVES SFNAEITVGN GVAG
101: TIVQFDNKPT EEMAAIRIQK AFRGYLARRA LRALRGLVRL RSLMEGPVVK RQAISTLRSM QTFAHLQTQI RSRRLRMLEE NQALQKQLLQ KHAKELESMR
201: LGEEWDDSVQ SKEQVEAKLL SKYEASMRRE RAMAYSFSHQ HNWKNASRSI NPMFMDPTNP AWGWSWLERW TAARPWESHS QMEKEKNGNK SLRSSSRGIT
301: SAEISKAFAK FQLNSEKHSP TASQNPGSPN FESHSQSHSN PPKPPSPAVA KKLKKASPKD ILAIDDDTKS MISVQSERPR RHSIAGSIVG DDESLASSPS
401: IPSYMVPTKS AKAKSRMQSP LAAEYGTPEK GSSGTAKKRL SFPASPARPR RHSGPPKVES SFNAEITVGN GVAG
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.