Factsheet for GSMUA_Achr7P18240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr2P09630_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT5G03040.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944
AT5G03040.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT5G03040.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT5G03040.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT5G03040.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	65.89	69.11
GSMUA_Achr3P17820_001	Banana	cytosol	68.22	67.36
Os05t0123200-01	Rice	plasma membrane	56.99	56.75
KXG21175	Sorghum	cytosol	54.03	53.91
Zm00001d035492_P009	Maize	cytosol	54.24	53.78
TraesCS1D01G064700.1	Wheat	cytosol	54.45	53.77
TraesCS1B01G082100.1	Wheat	cytosol	54.45	53.54
TraesCS1A01G064100.1	Wheat	cytosol	54.45	53.54
HORVU1Hr1G013210.1	Barley	cytosol	54.87	53.51
Zm00001d010975_P003	Maize	cytosol	52.12	51.46
VIT_08s0040g02360.t01	Wine grape	nucleus	50.21	49.48
KRG95941	Soybean	nucleus	48.52	48.01
CDY11238	Canola	cytosol, plastid	41.74	47.7
KRH67648	Soybean	nucleus	48.09	47.59
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	45.55	46.84
PGSC0003DMT400045333	Potato	cytosol	46.61	46.71
GSMUA_Achr7P22680_001	Banana	cytosol	45.76	46.45
KRH19825	Soybean	cytosol	45.97	46.17
Solyc10g086060.1.1	Tomato	cytosol	45.97	46.07
CDX80849	Canola	cytosol, plastid	41.31	45.77
KRH32420	Soybean	cytosol	45.76	45.57
Solyc10g084280.1.1	Tomato	nucleus	45.76	45.19
GSMUA_Achr10P...	Banana	cytosol	40.25	45.02
PGSC0003DMT400027139	Potato	cytosol	45.76	44.91
Solyc09g007410.2.1	Tomato	cytosol	45.76	44.72
PGSC0003DMT400004433	Potato	cytosol	45.34	44.58
CDY04876	Canola	nucleus, plastid	41.31	43.82
CDY10410	Canola	cytosol, plastid	40.89	43.47
Bra028854.1-P	Field mustard	nucleus, plastid	40.89	43.37
CDY55696	Canola	nucleus, plastid	40.04	43.25
AT5G03040.1	Thale cress	cytosol, plastid	41.95	42.95
TraesCS3D01G543500.1	Wheat	cytosol	44.92	42.74
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	45.34	40.68
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	45.34	40.3
AT3G09710.2	Thale cress	nucleus	39.62	39.96
CDX70333	Canola	cytosol	40.25	39.58
Bra009554.1-P	Field mustard	cytosol	39.19	39.28
GSMUA_Achr11P...	Banana	mitochondrion	38.35	39.18
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	46.61	37.67
Bra034081.1-P	Field mustard	nucleus	34.96	37.16
CDX73992	Canola	nucleus	34.96	34.59
Bra001299.1-P	Field mustard	nucleus	34.11	34.04
CDY07937	Canola	nucleus	33.26	32.85
CDY22198	Canola	cytosol	36.65	30.95
CDY41307	Canola	cytosol	34.96	30.16
GSMUA_Achr1P18950_001	Banana	nucleus	27.54	28.38
GSMUA_Achr7P02870_001	Banana	mitochondrion	18.01	28.24
GSMUA_Achr8P32220_001	Banana	cytosol	25.64	27.69
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	26.91	27.55
GSMUA_Achr4P22800_001	Banana	cytosol	25.0	27.19
GSMUA_Achr2P16650_001	Banana	nucleus	24.15	26.89
GSMUA_Achr1P16160_001	Banana	nucleus	25.21	26.56
GSMUA_Achr6P02050_001	Banana	cytosol	8.69	26.45
GSMUA_Achr4P31410_001	Banana	cytosol	24.58	26.36
GSMUA_Achr2P20050_001	Banana	nucleus	16.53	26.35
GSMUA_Achr10P...	Banana	cytosol	25.21	26.33
GSMUA_Achr6P14440_001	Banana	nucleus	9.53	26.32
GSMUA_Achr5P02600_001	Banana	cytosol	24.36	26.2
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	22.67	25.97
GSMUA_Achr10P...	Banana	cytosol	23.09	25.77
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	16.1	24.76
GSMUA_Achr6P04930_001	Banana	cytosol	20.97	24.38
GSMUA_Achr2P15730_001	Banana	cytosol	20.97	22.45

Protein Annotations

EnsemblPlants:GSMUA_Achr7P18240_001	EnsemblPlants:GSMUA_Achr7T18240_001	EnsemblPlantsGene:GSMUA_Achr7G18240_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28	PFAM:PF00612	PFscan:PS50096
SEG:seg	UniParc:UPI00029486EE	UniProt:M0TIL1	MapMan:35.1	:	:

Description

Putative Protein IQ-DOMAIN 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18240_001]

Coordinates

chr7:+:21026697..21029835

Molecular Weight (calculated)

51775.4 Da

IEP (calculated)

10.460

GRAVY (calculated)

-0.722

Length

472 amino acids

Sequence
(BLAST)

001: MGKKAKWFGA VKKVFSPESR EKKKERLKKK LGTRTFKAAD PCPADSLECA VPREVLPPPQ THPEEDEVVE GETEQSNPDP PVALATPAAT EPVATVEAAT
101: EIIQLAATTK FPGKTREEIA AIEIQTAFRA YMARRELRAM KGLVRLKSLM HGNSVKRQAT TTLRSMQTLA RVQSQILSRR MRLMEENQVL QRQMLLKHER
201: DLENLKMGEE WDDSLQSREQ IEASLLGKQE AAVRRERALA YAFSHQWKST SKSTNPMFLD PNNLQWGWSW VERWTAAKPW ETRGTTDKEL SNGRASAKSA
301: TESDACAEAN PDKLSPAARK PSTVPPPTRT PRLTGKTKSA SPKLGSASSI ISMQSERSRR RSLETAAAAP ARDDESLAGS LAVRSYMAPT ESARAKSRFQ
401: SLSNDDAEAP DKASIAPAKK RLSLPTGDRH NAAPPAAMRR KSGPPKVDVA SAKDGAGPDL TTIESTGAIT SF

Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)

001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

Arabidopsis Description

iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.