Factsheet for GSMUA_Achr10P22320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	46.02	45.02
KRH64435	Soybean	nucleus	45.35	44.28
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	44.69	44.1
KRH53505	Soybean	cytosol	43.36	43.95
PGSC0003DMT400023467	Potato	nucleus	44.47	42.86
Solyc03g083100.2.1	Tomato	nucleus	44.03	42.43
PGSC0003DMT400050471	Potato	cytosol	36.06	40.05
AT3G49260.3	Thale cress	nucleus	41.37	39.62
Solyc06g052010.1.1	Tomato	cytosol	34.73	39.55
Bra017997.1-P	Field mustard	nucleus, plastid	40.71	38.74
CDY05917	Canola	mitochondrion, nucleus	40.71	38.74
CDY08120	Canola	mitochondrion, nucleus	39.6	37.76
CDX86983	Canola	nucleus	39.6	37.68
Bra019589.1-P	Field mustard	nucleus	38.94	37.05
CDY00196	Canola	nucleus	38.94	37.05
GSMUA_Achr6P02050_001	Banana	cytosol	11.5	33.55
CDY05918	Canola	mitochondrion	21.68	31.21
GSMUA_Achr10P...	Banana	nucleus	27.43	27.56
GSMUA_Achr1P18950_001	Banana	nucleus	27.43	27.07
GSMUA_Achr3P17820_001	Banana	cytosol	27.88	26.36
GSMUA_Achr1P16160_001	Banana	nucleus	25.89	26.12
GSMUA_Achr7P22680_001	Banana	cytosol	26.33	25.59
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	25.89	25.38
GSMUA_Achr7P18240_001	Banana	cytosol	26.33	25.21
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	25.22	24.84
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	16.59	24.43
GSMUA_Achr10P...	Banana	cytosol	22.57	24.17
GSMUA_Achr10P...	Banana	cytosol	22.12	23.64
GSMUA_Achr7P02870_001	Banana	mitochondrion	15.71	23.59
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	21.46	23.54
GSMUA_Achr4P31410_001	Banana	cytosol	22.79	23.41
GSMUA_Achr8P32220_001	Banana	cytosol	22.12	22.88
GSMUA_Achr5P02600_001	Banana	cytosol	22.12	22.78
GSMUA_Achr2P16650_001	Banana	nucleus	21.24	22.64
GSMUA_Achr2P20050_001	Banana	nucleus	14.82	22.64
GSMUA_Achr6P04930_001	Banana	cytosol	20.13	22.41
GSMUA_Achr4P22800_001	Banana	cytosol	20.8	21.66
GSMUA_Achr11P...	Banana	mitochondrion	21.9	21.43
GSMUA_Achr2P15730_001	Banana	cytosol	20.58	21.09
GSMUA_Achr6P14440_001	Banana	nucleus	7.74	20.47

Protein Annotations

EnsemblPlants:GSMUA_Achr10P22320_001	EnsemblPlants:GSMUA_Achr10T22320_001	EnsemblPlantsGene:GSMUA_Achr10G22320_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF33
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000295014B
UniProt:M0RKF7	MapMan:35.1	:	:	:	:

Description

IQ-domain 21 [Source:Projected from Arabidopsis thaliana (AT3G49260) TAIR;Acc:AT3G49260]

Coordinates

chr10:+:27561661..27564655

Molecular Weight (calculated)

50046.9 Da

IEP (calculated)

10.073

GRAVY (calculated)

-0.706

Length

452 amino acids

Sequence
(BLAST)

001: MGKKTSWLST VKKVFKPKDS SPPEADAEAE AEENDGAAAE IVSVEHFPAE TSPEATNHES GGGWGEEVAE RERAIAAATR AAAAAAEAAA RVVRLAGCVR
101: PSKEERAAVV IQSVYRGYLA RRALRALRGL VRLQALVRGH HVRKQAHMTW RCMQSLVRVQ ALVRNRRLQE EEEADGGGNR RVYMKSHNSK SLGLRNWDGR
201: QQSLDAIAVN SQRKHNALVR RERALAYAYT YQQQQQQQRW HEKPQWGWNW LERWMAAQQW EARHGAPPPQ PMSSYVTATA MDGLSEKTVE MDPGRRSPIN
301: PMHYSYHLRD DPGRQPAVPS YMAATQSAMA KVRAQAPPVT KWNSTSRRAK SGNMADSSSS GGGTSATINP VGRSPIHMGV GLAGRHTGYS PDSSCGGDDC
401: TPPFGGQNNA TSDESMSSLM QLLRHYLELN QIPDKLSRNP SYLFDLRITL FI

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.