Factsheet for GSMUA_AchrUn_randomP19940_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P16160_001	Banana	nucleus	80.26	82.59
GSMUA_Achr1P18950_001	Banana	nucleus	78.09	78.6
GSMUA_Achr6P02050_001	Banana	cytosol	23.21	69.03
TraesCSU01G104800.3	Wheat	nucleus	73.32	62.02
TraesCS7A01G317400.2	Wheat	nucleus	73.1	61.95
HORVU7Hr1G075720.1	Barley	plasma membrane	73.32	61.9
TraesCS7B01G218800.3	Wheat	nucleus	72.89	61.65
Os08t0115200-01	Rice	cytosol	72.02	61.14
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	40.35	60.59
Zm00001d049684_P002	Maize	cytosol, mitochondrion	67.9	57.54
EES14418	Sorghum	cytosol	70.72	56.79
VIT_15s0048g02680.t01	Wine grape	nucleus	63.99	52.96
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	60.3	52.06
Solyc10g005000.2.1	Tomato	nucleus	43.82	51.27
KRH47821	Soybean	nucleus	59.0	49.82
KRH06386	Soybean	mitochondrion, nucleus	59.0	49.45
VIT_16s0098g01070.t01	Wine grape	mitochondrion, nucleus	48.37	48.27
Solyc08g083240.2.1	Tomato	nucleus	50.33	47.44
PGSC0003DMT400031576	Potato	nucleus	50.98	47.38
CDX90011	Canola	nucleus	51.19	46.46
PGSC0003DMT400029325	Potato	mitochondrion	33.41	46.39
CDY15200	Canola	nucleus	51.41	46.38
AT4G00820.1	Thale cress	mitochondrion, nucleus	52.93	45.69
Bra033284.1-P	Field mustard	nucleus	51.19	44.87
CDY69140	Canola	mitochondrion, nucleus	49.02	43.05
CDX91859	Canola	mitochondrion, nucleus	49.46	43.02
AT1G01110.2	Thale cress	nucleus	49.02	42.88
Bra000930.1-P	Field mustard	mitochondrion, nucleus	48.16	42.29
CDY05111	Canola	nucleus	39.26	42.19
Bra000717.1-P	Field mustard	nucleus	39.48	42.13
CDX90766	Canola	nucleus	39.26	42.0
AT4G10640.1	Thale cress	nucleus	37.74	41.13
Solyc01g009340.2.1	Tomato	nucleus	30.15	34.49
PGSC0003DMT400038175	Potato	cytosol	38.39	34.24
CDY08131	Canola	nucleus	25.38	34.01
Bra017988.1-P	Field mustard	nucleus	25.6	33.71
CDY05931	Canola	nucleus	25.38	33.24
GSMUA_Achr10P...	Banana	nucleus	31.24	32.0
AT3G49380.1	Thale cress	nucleus	24.08	31.53
GSMUA_Achr3P17820_001	Banana	cytosol	30.59	29.5
GSMUA_Achr7P22680_001	Banana	cytosol	29.28	29.03
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	28.42	28.54
GSMUA_Achr7P18240_001	Banana	cytosol	27.55	26.91
GSMUA_Achr2P16650_001	Banana	nucleus	24.73	26.89
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	23.86	26.7
GSMUA_Achr10P...	Banana	cytosol	24.3	26.54
GSMUA_Achr2P20050_001	Banana	nucleus	16.92	26.35
GSMUA_Achr4P22800_001	Banana	cytosol	24.73	26.27
GSMUA_Achr10P...	Banana	cytosol	24.08	26.24
GSMUA_Achr5P02600_001	Banana	cytosol	24.73	25.97
GSMUA_Achr10P...	Banana	cytosol	25.38	25.89
GSMUA_Achr8P32220_001	Banana	cytosol	24.3	25.63
GSMUA_Achr11P...	Banana	mitochondrion	25.6	25.54
GSMUA_Achr4P31410_001	Banana	cytosol	23.64	24.77
GSMUA_Achr6P04930_001	Banana	cytosol	21.69	24.63
GSMUA_Achr6P14440_001	Banana	nucleus	9.11	24.56
GSMUA_Achr2P15730_001	Banana	cytosol	22.56	23.58
GSMUA_Achr7P02870_001	Banana	mitochondrion	14.53	22.26

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP19940_001	EnsemblPlants:GSMUA_AchrUn_randomT19940_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG19940_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF50
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000296B022
UniProt:M0UAQ3	MapMan:35.2	:	:	:	:

Description

IQ calmodulin-binding motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19940_001]

Coordinates

chrchrUn_random:+:96750929..96752919

Molecular Weight (calculated)

51471.6 Da

IEP (calculated)

11.318

GRAVY (calculated)

-0.820

Length

461 amino acids

Sequence
(BLAST)

001: MGRKGSSSWL TAVKRAFRSP SKDAEKKTAR RREEPDQEEE EKVSHKREKR RWIFRKSSAQ DQQQQVPQAK ASPLPAVTPE QRHAIALAVA SAATAEAAVA
101: TAQAAAEVVR LTRPSASFVK EHYAAIVIQT AFRGYLARRA LRALKGLVKL QALVRGHNVR KQANMTLRCM QALVRVQARV RDQRVRLAQE SSAAVSRGSN
201: KSSFNCDTSF WESKYFQELA ERRSMSRDGS SFADDWDDRP RTMEEIQAML QVRKEAALKR ERALSYAFSH QVSSKKLVSS SPVASVEDKR PHRWMDRWIA
301: SRPSFDNRVS SRARASTDYR DPIKTLEIDT ARPFSYSAPA NPRRQTPPPP PQPHHPAPLG AAVPNYMAAT ESAKARVRSQ SAPRQRPGTP DRDRGGSAKK
401: RLSFPAPDQQ GCSQNLRSPS FKSAAGWFPG EQRSNVSSCC NDSLGGEVSP SSTTDLRPWL R

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.