CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049684_P002	Maize	cytosol, mitochondrion	83.45	88.05
Os08t0115200-01	Rice	cytosol	78.57	83.06
TraesCS7A01G317400.2	Wheat	nucleus	77.35	81.62
TraesCS7B01G218800.3	Wheat	nucleus	77.18	81.28
HORVU7Hr1G075720.1	Barley	plasma membrane	76.83	80.77
TraesCSU01G104800.3	Wheat	nucleus	76.66	80.73
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	56.79	70.72
GSMUA_Achr1P18950_001	Banana	nucleus	55.92	70.09
GSMUA_Achr1P16160_001	Banana	nucleus	54.01	69.2
Solyc10g005000.2.1	Tomato	nucleus	38.15	55.58
VIT_15s0048g02680.t01	Wine grape	nucleus	52.79	54.4
KRH47821	Soybean	nucleus	51.74	54.4
KRH06386	Soybean	mitochondrion, nucleus	51.74	54.0
PGSC0003DMT400029325	Potato	mitochondrion	30.66	53.01
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	48.95	52.62
VIT_16s0098g01070.t01	Wine grape	mitochondrion, nucleus	41.81	51.95
Solyc08g083240.2.1	Tomato	nucleus	43.21	50.72
CDY15200	Canola	nucleus	45.12	50.68
PGSC0003DMT400031576	Potato	nucleus	43.73	50.6
CDX90011	Canola	nucleus	44.77	50.59
AT4G00820.1	Thale cress	mitochondrion, nucleus	46.69	50.19
Bra033284.1-P	Field mustard	nucleus	45.64	49.81
CDY69140	Canola	mitochondrion, nucleus	44.77	48.95
AT1G01110.2	Thale cress	nucleus	44.6	48.58
CDX91859	Canola	mitochondrion, nucleus	44.77	48.49
Bra000930.1-P	Field mustard	mitochondrion, nucleus	43.9	48.0
CDY05111	Canola	nucleus	34.49	46.15
Bra000717.1-P	Field mustard	nucleus	34.67	46.06
CDX90766	Canola	nucleus	34.49	45.94
AT4G10640.1	Thale cress	nucleus	32.93	44.68
Solyc01g009340.2.1	Tomato	nucleus	26.31	37.47
PGSC0003DMT400038175	Potato	cytosol	32.58	36.17
CDY08131	Canola	nucleus	21.6	36.05
Bra017988.1-P	Field mustard	nucleus	21.78	35.71
CDY05931	Canola	nucleus	21.6	35.23
AT3G49380.1	Thale cress	nucleus	20.73	33.81
KXG33651	Sorghum	cytosol	25.78	29.72
KXG21175	Sorghum	cytosol	24.39	29.6
OQU86150	Sorghum	cytosol	20.73	26.8
EES03502	Sorghum	mitochondrion	19.69	25.86
KXG24027	Sorghum	cytosol	19.34	25.23
EER90769	Sorghum	mitochondrion	18.29	23.86
EER87873	Sorghum	nucleus	13.76	23.72
EES01898	Sorghum	cytosol	21.95	22.38
EER91163	Sorghum	cytosol	16.38	22.27
KXG22437	Sorghum	mitochondrion, plastid	19.69	20.7
OQU78148	Sorghum	cytosol	19.34	19.82

Protein Annotations

EnsemblPlants:EES14418	EnsemblPlantsGene:SORBI_3007G017700	EntrezGene:8068566	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF0
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:EES14418	ProteinID:EES14418.1	RefSeq:XP_002444923.1
SEG:seg	SMART:SM00015	UniParc:UPI0001A87983	UniProt:C5YM18	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:-:1520305..1522800

Molecular Weight (calculated)

61755.1 Da

IEP (calculated)

11.534

GRAVY (calculated)

-0.694

Length

574 amino acids

Sequence
(BLAST)

001: MGKKGGTSWL TAVKRAFRSP SKDDSSSPTR KASRLREDAD GDDDKGKREQ RRRWLFRRSS SPSPSPSPAP APTAADHSHP HPRPAAVTEE QRHAIALAVA
101: TAATAEAAVA TAQAAAEVVR LTRPGAVPAS TAGSSFVRRE HYAAVVIQTA FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QANMTLRCMQ ALVRVQARVR
201: DQRMRLSQDS MLSMSMSGAG AGAAPCGSSK SSYSVDTSTF WDSKYAHDYA DRRSVERSRD GSSFAADDWD DRPRTIEEIQ AMLQTRKDAA LKRERALSYA
301: FSHQIWRNPA VAASASAEEM MDVDDGKPRW AERWMASRAS FDTNRSSIRG AGGAAVPGRA SMDQREPVKT LEMDTARPFS YSTPRRGSSS PMHRAHQQQQ
401: QQHPAVATPS PVKARPPIQV RSASPRVDHH NHHRGSGGGG SYTPSLLHSQ RHASSSAAAV PNYMAATESA KARVRSQSAP RQRPATPERD RGGGGGSAGA
501: AAAASGAKKR LSFPAQLSAA AEYAASLRSP SFKSAAGRFS SEQRSTVSSS CADSVGGDVV VSPSSTTDLR RWLR

Best Arabidopsis Sequence Match ( AT1G01110.2 )
(BLAST)

001: MGKKNGSSSW LTAVKRAFRS PTKKDHSNDV EEDEEKKREK RRWFRKPATQ ESPVKSSGIS PPAPQEDSLN VNSKPSPETA PSYATTTPPS NAGKPPSAVV
101: PIATSASKTL APRRIYYARE NYAAVVIQTS FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QAKMTLRCMQ ALVRVQSRVL DQRKRLSHDG SRKSAFSDSH
201: AVFESRYLQD LSDRQSMSRE GSSAAEDWDD RPHTIDAVKV MLQRRRDTAL RHDKTNLSQA FSQKMWRTVG NQSTEGHHEV ELEEERPKWL DRWMATRPWD
301: KRASSRASVD QRVSVKTVEI DTSQPYSRTG AGSPSRGQRP SSPSRTSHHY QSRNNFSATP SPAKSRPILI RSASPRCQRD PREDRDRAAY SYTSNTPSLR
401: SNYSFTARSG CSISTTMVNN ASLLPNYMAS TESAKARIRS HSAPRQRPST PERDRAGLVK KRLSYPVPPP AEYEDNNSLR SPSFKSVAGS HFGGMLEQQS
501: NYSSCCTESN GVEISPASTS DFRNWLR

Arabidopsis Description

IQD18IQ-domain 18 [Source:UniProtKB/TrEMBL;Acc:Q9MAM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.