Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08131 | Canola | nucleus | 92.33 | 94.48 |
| AT3G49380.1 | Thale cress | nucleus | 73.3 | 73.3 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 13.64 | 30.97 |
| VIT_16s0098g01070.t01 | Wine grape | mitochondrion, nucleus | 37.78 | 28.79 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 33.52 | 25.76 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.24 | 25.38 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 31.53 | 24.78 |
| CDY15200 | Canola | nucleus | 34.38 | 23.68 |
| TraesCS7A01G317400.2 | Wheat | nucleus | 36.08 | 23.35 |
| HORVU7Hr1G075720.1 | Barley | plasma membrane | 36.08 | 23.26 |
| TraesCS7B01G218800.3 | Wheat | nucleus | 35.8 | 23.12 |
| TraesCSU01G104800.3 | Wheat | nucleus | 35.8 | 23.12 |
| CDX96427 | Canola | cytosol | 15.91 | 23.05 |
| CDX90011 | Canola | nucleus | 33.24 | 23.03 |
| CDY05111 | Canola | nucleus | 27.84 | 22.84 |
| Os08t0115200-01 | Rice | cytosol | 35.23 | 22.84 |
| Solyc01g009340.2.1 | Tomato | nucleus | 26.14 | 22.83 |
| CDY69140 | Canola | mitochondrion, nucleus | 33.24 | 22.29 |
| CDX90766 | Canola | nucleus | 27.27 | 22.27 |
| PGSC0003DMT400038175 | Potato | cytosol | 32.67 | 22.24 |
| CDX72935 | Canola | cytosol | 16.48 | 22.05 |
| CDY35313 | Canola | nucleus | 24.72 | 21.91 |
| CDX77034 | Canola | cytosol | 24.43 | 21.72 |
| CDX91859 | Canola | mitochondrion, nucleus | 32.67 | 21.7 |
| EES14418 | Sorghum | cytosol | 35.23 | 21.6 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 32.95 | 21.32 |
| CDX95328 | Canola | cytosol | 25.57 | 20.22 |
| CDY23202 | Canola | cytosol | 25.57 | 20.22 |
| CDY05917 | Canola | mitochondrion, nucleus | 26.14 | 19.37 |
| CDY37387 | Canola | cytosol | 20.45 | 18.75 |
| CDY39505 | Canola | cytosol | 21.02 | 18.73 |
| CDY08120 | Canola | mitochondrion, nucleus | 25.0 | 18.57 |
| CDY32322 | Canola | cytosol, plastid | 13.64 | 18.53 |
| CDY17214 | Canola | cytosol, plastid | 13.92 | 18.49 |
| CDY10618 | Canola | cytosol | 21.31 | 18.47 |
| CDY11238 | Canola | cytosol, plastid | 21.31 | 18.16 |
| CDX92933 | Canola | cytosol, plastid | 20.45 | 17.96 |
| CDY48305 | Canola | nucleus | 19.03 | 17.87 |
| CDY26241 | Canola | nucleus | 19.03 | 17.87 |
| CDX80849 | Canola | cytosol, plastid | 21.59 | 17.84 |
| CDY24286 | Canola | cytosol | 20.45 | 17.82 |
| CDY27925 | Canola | plastid | 13.35 | 17.74 |
| CDX86983 | Canola | nucleus | 23.86 | 17.68 |
| CDY55696 | Canola | nucleus, plastid | 21.59 | 17.39 |
| CDY04876 | Canola | nucleus, plastid | 21.88 | 17.3 |
| CDY00196 | Canola | nucleus | 23.3 | 17.26 |
| CDY10410 | Canola | cytosol, plastid | 21.59 | 17.12 |
| CDY30433 | Canola | cytosol | 21.88 | 17.11 |
| CDY20099 | Canola | cytosol | 12.78 | 17.05 |
| CDY23391 | Canola | cytosol | 22.16 | 16.92 |
| CDY58749 | Canola | cytosol | 21.59 | 16.67 |
| CDY05984 | Canola | nucleus | 22.73 | 16.16 |
| CDX71881 | Canola | nucleus | 22.44 | 15.99 |
| CDY62768 | Canola | cytosol | 12.5 | 15.88 |
| CDX70333 | Canola | cytosol | 20.74 | 15.21 |
| CDY38525 | Canola | cytosol | 17.05 | 14.53 |
| CDX79809 | Canola | nucleus | 23.86 | 14.05 |
| CDY66694 | Canola | nucleus | 23.3 | 13.69 |
| CDY07937 | Canola | nucleus | 17.05 | 12.55 |
| CDY44247 | Canola | nucleus | 19.32 | 12.23 |
| CDX83237 | Canola | cytosol | 17.61 | 12.23 |
| CDX83468 | Canola | plasma membrane | 19.03 | 12.16 |
| CDX73992 | Canola | nucleus | 16.48 | 12.16 |
| CDY05918 | Canola | mitochondrion | 10.8 | 12.1 |
| CDY22198 | Canola | cytosol | 17.9 | 11.27 |
| CDX96426 | Canola | nucleus, plastid | 3.12 | 10.78 |
| CDX72934 | Canola | nucleus, plastid | 3.12 | 10.78 |
| CDY41307 | Canola | cytosol | 16.48 | 10.6 |
| CDX92931 | Canola | mitochondrion, nucleus | 7.67 | 10.59 |
| CDY24282 | Canola | mitochondrion | 7.39 | 8.52 |
Protein Annotations
| EnsemblPlants:CDY05931 | EnsemblPlantsGene:GSBRNA2T00121750001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF92 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY05931 | ProteinID:CDY05931.1 | SEG:seg |
| SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI0004EE763C | MapMan:35.2 | : | : |
Description
BnaC08g21080D
Coordinates
chrLK031966:-:635787..637567
Molecular Weight (calculated)
40261.8 Da
IEP (calculated)
11.038
GRAVY (calculated)
-0.871
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKNGGSSWL TAVKNVFRSP EKKCPRRRER QQDNGLVQED EEEHQQQTKR GKRRWLFKKA SSDSCARDVG INIKNAVNTN SASVDAIAVD ETEKKASPAA
101: KEAVFFCRTS VYLKRHLAAI LIQTAYRGCL ARKAFKALKG VVLLQALVRG HNVRRRASIT LLRVQALVRV QARVLDHRKK LTASPGDGTT LSRAFSKQMW
201: RTTAREAHSE SKLEDKRQNR LNRFGYQEIG RRLSTDQTIV EPVKIVEIDT YNTYSHHQQL KDRTPRGNSR VTRQGHSIPN YMSTTASTVA RFRPHSAPRQ
301: RSNQTGLDDN EPRLQLVRKR LSFHKDIPQS HGYFWYDKEM DDHDSRGCSA LN
101: KEAVFFCRTS VYLKRHLAAI LIQTAYRGCL ARKAFKALKG VVLLQALVRG HNVRRRASIT LLRVQALVRV QARVLDHRKK LTASPGDGTT LSRAFSKQMW
201: RTTAREAHSE SKLEDKRQNR LNRFGYQEIG RRLSTDQTIV EPVKIVEIDT YNTYSHHQQL KDRTPRGNSR VTRQGHSIPN YMSTTASTVA RFRPHSAPRQ
301: RSNQTGLDDN EPRLQLVRKR LSFHKDIPQS HGYFWYDKEM DDHDSRGCSA LN
001: MGKTDGSSWF TAVKNVFRSP EKLIPRRINR RQDNDLVEEV EDELHQRPKR RKRRWLFKKV SSDPCAINVG INTTSTAINA IAAEETEKTV SPAAKETVFF
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
Arabidopsis Description
iqd15IQ-domain 15 [Source:UniProtKB/TrEMBL;Acc:Q9SG11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.