Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90011 | Canola | nucleus | 98.04 | 98.62 |
| Bra033284.1-P | Field mustard | nucleus | 97.85 | 95.06 |
| AT1G01110.2 | Thale cress | nucleus | 83.95 | 81.4 |
| CDY69140 | Canola | mitochondrion, nucleus | 68.49 | 66.67 |
| CDX91859 | Canola | mitochondrion, nucleus | 68.3 | 65.85 |
| Solyc10g005000.2.1 | Tomato | nucleus | 45.79 | 59.39 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 37.38 | 57.53 |
| KRH47821 | Soybean | nucleus | 61.06 | 57.14 |
| VIT_15s0048g02680.t01 | Wine grape | nucleus | 61.06 | 56.01 |
| KRH06386 | Soybean | mitochondrion, nucleus | 60.27 | 56.0 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 46.18 | 51.53 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 46.38 | 51.41 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 44.81 | 51.12 |
| TraesCS7B01G218800.3 | Wheat | nucleus | 51.86 | 48.62 |
| HORVU7Hr1G075720.1 | Barley | plasma membrane | 51.66 | 48.35 |
| TraesCS7A01G317400.2 | Wheat | nucleus | 51.47 | 48.35 |
| TraesCSU01G104800.3 | Wheat | nucleus | 51.47 | 48.26 |
| Os08t0115200-01 | Rice | cytosol | 51.27 | 48.25 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 14.29 | 47.1 |
| EES14418 | Sorghum | cytosol | 50.68 | 45.12 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 47.95 | 45.04 |
| CDY05111 | Canola | nucleus | 36.79 | 43.82 |
| CDX90766 | Canola | nucleus | 36.59 | 43.39 |
| CDY08131 | Canola | nucleus | 23.87 | 35.47 |
| CDY05931 | Canola | nucleus | 23.68 | 34.38 |
| CDY23202 | Canola | cytosol | 25.64 | 29.44 |
| CDY11238 | Canola | cytosol, plastid | 23.48 | 29.06 |
| CDX95328 | Canola | cytosol | 25.24 | 28.99 |
| CDY35313 | Canola | nucleus | 22.31 | 28.72 |
| CDY37387 | Canola | cytosol | 21.53 | 28.65 |
| CDX80849 | Canola | cytosol, plastid | 23.87 | 28.64 |
| CDY24286 | Canola | cytosol | 22.5 | 28.47 |
| CDX77034 | Canola | cytosol | 21.92 | 28.28 |
| CDX92933 | Canola | cytosol, plastid | 22.11 | 28.18 |
| CDY10410 | Canola | cytosol, plastid | 24.27 | 27.93 |
| CDY04876 | Canola | nucleus, plastid | 24.27 | 27.87 |
| CDY10618 | Canola | cytosol | 22.11 | 27.83 |
| CDY55696 | Canola | nucleus, plastid | 23.29 | 27.23 |
| CDY17214 | Canola | cytosol, plastid | 14.09 | 27.17 |
| CDY27925 | Canola | plastid | 14.09 | 27.17 |
| CDX96427 | Canola | cytosol | 12.92 | 27.16 |
| CDX72935 | Canola | cytosol | 13.5 | 26.24 |
| CDY62768 | Canola | cytosol | 13.7 | 25.27 |
| CDY39505 | Canola | cytosol | 19.37 | 25.06 |
| CDX70333 | Canola | cytosol | 23.29 | 24.79 |
| CDY32322 | Canola | cytosol, plastid | 12.33 | 24.32 |
| CDX71881 | Canola | nucleus | 23.29 | 24.09 |
| CDY30433 | Canola | cytosol | 21.14 | 24.0 |
| CDY58749 | Canola | cytosol | 21.33 | 23.9 |
| CDY20099 | Canola | cytosol | 12.33 | 23.86 |
| CDY23391 | Canola | cytosol | 21.53 | 23.86 |
| CDY05984 | Canola | nucleus | 23.09 | 23.84 |
| CDY00196 | Canola | nucleus | 21.92 | 23.58 |
| CDY05917 | Canola | mitochondrion, nucleus | 21.92 | 23.58 |
| CDX86983 | Canola | nucleus | 21.92 | 23.58 |
| CDY08120 | Canola | mitochondrion, nucleus | 21.33 | 23.0 |
| CDY38525 | Canola | cytosol | 18.0 | 22.28 |
| CDY48305 | Canola | nucleus | 15.85 | 21.6 |
| CDY26241 | Canola | nucleus | 15.66 | 21.33 |
| CDX92931 | Canola | mitochondrion, nucleus | 10.37 | 20.78 |
| CDX83237 | Canola | cytosol | 19.77 | 19.92 |
| CDX83468 | Canola | plasma membrane | 20.35 | 18.87 |
| CDY44247 | Canola | nucleus | 20.35 | 18.7 |
| CDX73992 | Canola | nucleus | 17.42 | 18.66 |
| CDX79809 | Canola | nucleus | 21.72 | 18.56 |
| CDY66694 | Canola | nucleus | 21.33 | 18.2 |
| CDY24282 | Canola | mitochondrion | 10.76 | 18.03 |
| CDY07937 | Canola | nucleus | 16.63 | 17.78 |
| CDY41307 | Canola | cytosol | 18.79 | 17.55 |
| CDY22198 | Canola | cytosol | 19.18 | 17.53 |
| CDY05918 | Canola | mitochondrion | 10.76 | 17.52 |
| CDX72934 | Canola | nucleus, plastid | 2.94 | 14.71 |
| CDX96426 | Canola | nucleus, plastid | 2.94 | 14.71 |
Protein Annotations
| EnsemblPlants:CDY15200 | EnsemblPlantsGene:GSBRNA2T00085386001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF50 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY15200 | ProteinID:CDY15200.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EE5998 | UniProt:A0A078FL80 | MapMan:35.2 | : | : | : |
Description
BnaC05g00790DBnaC05g00790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL80]
Coordinates
chrLK032052:-:408730..411249
Molecular Weight (calculated)
57764.5 Da
IEP (calculated)
10.895
GRAVY (calculated)
-1.052
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKNGSSWL SAVKRAFRSP SKKERNDPHG KEIEEDEEKK REKRRWLFKK PATQDSPVKP SGVSPPPPPQ ESDNANSKTL PETAPTTPPN AGKSPSAVVS
101: VATSASPVAV PNVTRRIYYA RENYAAVVIQ TSFRGYLARR ALRALKGLVK LQALVRGHNV RKQAKMTLRC MQALVRVQSR VLDQRKRLSH DGSRKSAFSD
201: THCGFESRYL QDISDRQSMS REGSSVPEDW DDRPHTIDEV KAMLQRRRDT ALRHEKTNLS QAFSQQTWRT TGSQSAGRDH RAELEEERPK WLDRWMATRP
301: WDKPPISRAS VDQRVSVKTV EIDTSQPYSR ARTGSPSRSQ RPSSPSRSSH HYQPRSNFSA TPSPAKSRPI NIRSASPRCQ RDPRDDYDRA AYSYTSNTPS
401: LRSNYTMLPN YMANTESAKA RIRSQSAPRQ RPSTPERERV GLVKKRLSFP VPPQPEYDDI NSLRSPSFKS VAGSHFGALL EQQSNYSSCC TESNGVEVSP
501: ASTSDYRNWL R
101: VATSASPVAV PNVTRRIYYA RENYAAVVIQ TSFRGYLARR ALRALKGLVK LQALVRGHNV RKQAKMTLRC MQALVRVQSR VLDQRKRLSH DGSRKSAFSD
201: THCGFESRYL QDISDRQSMS REGSSVPEDW DDRPHTIDEV KAMLQRRRDT ALRHEKTNLS QAFSQQTWRT TGSQSAGRDH RAELEEERPK WLDRWMATRP
301: WDKPPISRAS VDQRVSVKTV EIDTSQPYSR ARTGSPSRSQ RPSSPSRSSH HYQPRSNFSA TPSPAKSRPI NIRSASPRCQ RDPRDDYDRA AYSYTSNTPS
401: LRSNYTMLPN YMANTESAKA RIRSQSAPRQ RPSTPERERV GLVKKRLSFP VPPQPEYDDI NSLRSPSFKS VAGSHFGALL EQQSNYSSCC TESNGVEVSP
501: ASTSDYRNWL R
001: MGKKNGSSSW LTAVKRAFRS PTKKDHSNDV EEDEEKKREK RRWFRKPATQ ESPVKSSGIS PPAPQEDSLN VNSKPSPETA PSYATTTPPS NAGKPPSAVV
101: PIATSASKTL APRRIYYARE NYAAVVIQTS FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QAKMTLRCMQ ALVRVQSRVL DQRKRLSHDG SRKSAFSDSH
201: AVFESRYLQD LSDRQSMSRE GSSAAEDWDD RPHTIDAVKV MLQRRRDTAL RHDKTNLSQA FSQKMWRTVG NQSTEGHHEV ELEEERPKWL DRWMATRPWD
301: KRASSRASVD QRVSVKTVEI DTSQPYSRTG AGSPSRGQRP SSPSRTSHHY QSRNNFSATP SPAKSRPILI RSASPRCQRD PREDRDRAAY SYTSNTPSLR
401: SNYSFTARSG CSISTTMVNN ASLLPNYMAS TESAKARIRS HSAPRQRPST PERDRAGLVK KRLSYPVPPP AEYEDNNSLR SPSFKSVAGS HFGGMLEQQS
501: NYSSCCTESN GVEISPASTS DFRNWLR
101: PIATSASKTL APRRIYYARE NYAAVVIQTS FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QAKMTLRCMQ ALVRVQSRVL DQRKRLSHDG SRKSAFSDSH
201: AVFESRYLQD LSDRQSMSRE GSSAAEDWDD RPHTIDAVKV MLQRRRDTAL RHDKTNLSQA FSQKMWRTVG NQSTEGHHEV ELEEERPKWL DRWMATRPWD
301: KRASSRASVD QRVSVKTVEI DTSQPYSRTG AGSPSRGQRP SSPSRTSHHY QSRNNFSATP SPAKSRPILI RSASPRCQRD PREDRDRAAY SYTSNTPSLR
401: SNYSFTARSG CSISTTMVNN ASLLPNYMAS TESAKARIRS HSAPRQRPST PERDRAGLVK KRLSYPVPPP AEYEDNNSLR SPSFKSVAGS HFGGMLEQQS
501: NYSSCCTESN GVEISPASTS DFRNWLR
Arabidopsis Description
IQD18IQ-domain 18 [Source:UniProtKB/TrEMBL;Acc:Q9MAM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.