Factsheet for PGSC0003DMT400029325

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005000.2.1	Tomato	nucleus	80.72	68.02
KRH06386	Soybean	mitochondrion, nucleus	68.98	41.64
KRH47821	Soybean	nucleus	68.37	41.58
VIT_15s0048g02680.t01	Wine grape	nucleus	67.17	40.04
CDX90011	Canola	nucleus	57.53	37.6
CDY15200	Canola	nucleus	57.53	37.38
Bra033284.1-P	Field mustard	nucleus	58.43	36.88
AT4G00820.1	Thale cress	mitochondrion, nucleus	58.43	36.33
Bra000930.1-P	Field mustard	mitochondrion, nucleus	56.63	35.81
AT1G01110.2	Thale cress	nucleus	56.63	35.67
CDY69140	Canola	mitochondrion, nucleus	56.02	35.43
CDX91859	Canola	mitochondrion, nucleus	55.72	34.91
Os08t0115200-01	Rice	cytosol	56.02	34.25
GSMUA_Achr1P18950_001	Banana	nucleus	46.99	34.06
HORVU7Hr1G075720.1	Barley	plasma membrane	55.42	33.7
TraesCS7A01G317400.2	Wheat	nucleus	55.12	33.64
TraesCSU01G104800.3	Wheat	nucleus	55.12	33.58
TraesCS7B01G218800.3	Wheat	nucleus	55.12	33.58
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	46.39	33.41
PGSC0003DMT400031576	Potato	nucleus	48.8	32.66
GSMUA_Achr1P16160_001	Banana	nucleus	43.37	32.14
Zm00001d049684_P002	Maize	cytosol, mitochondrion	50.9	31.07
EES14418	Sorghum	cytosol	53.01	30.66
GSMUA_Achr6P02050_001	Banana	cytosol	9.94	21.29
PGSC0003DMT400038175	Potato	cytosol	31.93	20.5
PGSC0003DMT400010610	Potato	nucleus	24.4	17.61
PGSC0003DMT400004433	Potato	cytosol	22.29	15.42
PGSC0003DMT400021183	Potato	cytosol	19.88	15.21
PGSC0003DMT400039646	Potato	mitochondrion	13.25	14.86
PGSC0003DMT400027139	Potato	cytosol	21.08	14.55
PGSC0003DMT400045333	Potato	cytosol	20.48	14.44
PGSC0003DMT400068456	Potato	cytosol	12.95	14.14
PGSC0003DMT400006376	Potato	cytosol	17.17	13.35
PGSC0003DMT400041427	Potato	cytosol	18.98	11.78
PGSC0003DMT400059119	Potato	cytosol	10.84	11.69
PGSC0003DMT400023467	Potato	nucleus	16.27	11.51
PGSC0003DMT400050471	Potato	cytosol	13.25	10.81
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	18.37	9.89

Protein Annotations

EnsemblPlants:PGSC0003DMT400029325	EnsemblPlantsGene:PGSC0003DMG400011269	InterPro:DUF4005	PANTHER:PTHR32295	PANTHER:PTHR32295:SF50	PFAM:PF13178
PGSC:PGSC0003DMG400011269	SEG:seg	UniParc:UPI0002958188	UniProt:M1ASL4	MapMan:35.2	:

Description

Calmodulin-binding protein family [Source:PGSC_GENE;Acc:PGSC0003DMG400011269]

Coordinates

chr10:-:69765..71952

Molecular Weight (calculated)

37731.8 Da

IEP (calculated)

10.772

GRAVY (calculated)

-1.132

Length

332 amino acids

Sequence
(BLAST)

001: MTLKCMQALV RVQARVLDQR FRQSEQGSRK STFSDTSSYH YLQHMSRDGS TIPDDWDERP HTIEEVKAML QKRKEAALKC RRTAFSQQTR RSGKNSSIGS
101: DADFGEKHQR MEQYWTAAKS WDSSRGRAST DPVKTVEMDT SQPLPPNLRR LDERQHQHQH QHQRPSSPLH TSFQFPVTPS PSKSRPIQVR SASPRCPRDE
201: KAQTPSLRSN NNYSSHQRNR LTSSAAAIPN YMAATESALS RIRSQSAPRQ RPSTPERDRA GSAKKRLSFP VPDRYGNVPS GYGHSLRSPS FKSLSGVHFG
301: YEQQSNYSSC YTESLGGEIS PSSTSDLRRY LR

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.