Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69140 | Canola | mitochondrion, nucleus | 81.09 | 82.48 |
| CDX91859 | Canola | mitochondrion, nucleus | 81.46 | 82.08 |
| Bra000930.1-P | Field mustard | mitochondrion, nucleus | 80.15 | 81.52 |
| AT1G01110.2 | Thale cress | nucleus | 69.1 | 70.02 |
| Solyc10g005000.2.1 | Tomato | nucleus | 44.19 | 59.9 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 36.33 | 58.43 |
| VIT_15s0048g02680.t01 | Wine grape | nucleus | 60.67 | 58.17 |
| KRH47821 | Soybean | nucleus | 58.8 | 57.51 |
| KRH06386 | Soybean | mitochondrion, nucleus | 59.18 | 57.45 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 45.88 | 53.49 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 45.69 | 52.93 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 43.26 | 51.56 |
| Os08t0115200-01 | Rice | cytosol | 51.31 | 50.46 |
| TraesCS7B01G218800.3 | Wheat | nucleus | 51.5 | 50.46 |
| TraesCSU01G104800.3 | Wheat | nucleus | 51.5 | 50.46 |
| TraesCS7A01G317400.2 | Wheat | nucleus | 51.31 | 50.37 |
| HORVU7Hr1G075720.1 | Barley | plasma membrane | 51.5 | 50.37 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 14.23 | 49.03 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 47.94 | 47.06 |
| EES14418 | Sorghum | cytosol | 50.19 | 46.69 |
| AT4G10640.1 | Thale cress | nucleus | 34.08 | 43.03 |
| AT3G49380.1 | Thale cress | nucleus | 21.91 | 33.24 |
| AT3G52290.1 | Thale cress | cytosol | 23.6 | 29.3 |
| AT2G26180.1 | Thale cress | cytosol | 22.1 | 28.37 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 23.22 | 26.9 |
| AT3G22190.2 | Thale cress | cytosol | 20.22 | 25.59 |
| AT2G33990.1 | Thale cress | cytosol | 12.17 | 24.71 |
| AT1G72670.1 | Thale cress | cytosol | 18.91 | 24.4 |
| AT3G49260.3 | Thale cress | nucleus | 21.54 | 24.36 |
| AT3G59690.2 | Thale cress | nucleus | 22.85 | 23.6 |
| AT3G15050.1 | Thale cress | plastid | 11.42 | 23.55 |
| AT1G17480.1 | Thale cress | cytosol | 16.29 | 23.45 |
| AT3G09710.2 | Thale cress | nucleus | 18.73 | 21.37 |
| AT2G26410.2 | Thale cress | cytosol | 19.66 | 19.92 |
| AT2G43680.1 | Thale cress | nucleus | 21.54 | 17.19 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EntrezGene:828002 | ProteinID:AEE81939.1 | ArrayExpress:AT4G00820 | EnsemblPlantsGene:AT4G00820 |
| RefSeq:AT4G00820 | TAIR:AT4G00820 | RefSeq:AT4G00820-TAIR-G | EnsemblPlants:AT4G00820.1 | TAIR:AT4G00820.1 | Unigene:At.28099 |
| InterPro:DUF4005 | UniProt:F4JHN2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_567191.2 | PFAM:PF00612 | PFAM:PF13178 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50096 |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF50 | SMART:SM00015 | UniParc:UPI000034F0DC | Symbol:iqd17 | SEG:seg |
Description
iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
Coordinates
chr4:+:349025..351550
Molecular Weight (calculated)
59998.8 Da
IEP (calculated)
10.906
GRAVY (calculated)
-1.027
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.