Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- extracellular 2
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38525 | Canola | cytosol | 58.06 | 74.09 |
| CDX83237 | Canola | cytosol | 69.26 | 71.99 |
| Solyc04g050050.2.1 | Tomato | cytosol | 29.79 | 39.85 |
| VIT_13s0019g03890.t01 | Wine grape | cytosol | 36.24 | 39.63 |
| AT3G52290.1 | Thale cress | cytosol | 31.69 | 38.84 |
| PGSC0003DMT400010610 | Potato | nucleus | 33.21 | 38.04 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 27.7 | 31.67 |
| AT3G09710.2 | Thale cress | nucleus | 25.05 | 28.21 |
| AT2G33990.1 | Thale cress | cytosol | 13.66 | 27.38 |
| AT3G15050.1 | Thale cress | plastid | 13.09 | 26.64 |
| AT3G22190.2 | Thale cress | cytosol | 18.22 | 22.75 |
| AT2G26180.1 | Thale cress | cytosol | 17.84 | 22.6 |
| AT3G59690.2 | Thale cress | nucleus | 20.87 | 21.28 |
| AT3G49260.3 | Thale cress | nucleus | 18.98 | 21.19 |
| AT4G10640.1 | Thale cress | nucleus | 16.7 | 20.8 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 19.92 | 19.66 |
| AT1G01110.2 | Thale cress | nucleus | 19.17 | 19.17 |
| AT1G72670.1 | Thale cress | cytosol | 14.61 | 18.6 |
| AT3G49380.1 | Thale cress | nucleus | 11.95 | 17.9 |
| AT1G17480.1 | Thale cress | cytosol | 12.33 | 17.52 |
| AT2G43680.1 | Thale cress | nucleus | 21.44 | 16.89 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817181 | ProteinID:AEC07834.1 | ProteinID:ANM63182.1 | ArrayExpress:AT2G26410 | EnsemblPlantsGene:AT2G26410 |
| RefSeq:AT2G26410 | TAIR:AT2G26410 | RefSeq:AT2G26410-TAIR-G | EnsemblPlants:AT2G26410.2 | ncoils:Coil | UniProt:F4IUJ7 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | Symbol:Iqd4 | RefSeq:NP_001325287.1 |
| RefSeq:NP_180209.4 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF6 | UniParc:UPI0001A7B014 | SEG:seg |
Description
Iqd4IQ-domain 4 [Source:UniProtKB/TrEMBL;Acc:F4IUJ7]
Coordinates
chr2:-:11234267..11236995
Molecular Weight (calculated)
58280.9 Da
IEP (calculated)
11.030
GRAVY (calculated)
-0.962
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKNWLTCVS VACLSPGKDK KNQKPEKPKR KWSFGKQKSR ESFDFPLEET PPVDPSPSSV HRPYPPPPPL PDFAPQPLLP PPSPPPPPPA YTINTRIYGE
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.