Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10618 | Canola | cytosol | 82.46 | 85.71 |
| Bra031331.1-P | Field mustard | cytosol | 77.25 | 84.9 |
| CDY37387 | Canola | cytosol | 77.25 | 84.9 |
| CDY24286 | Canola | cytosol | 80.57 | 84.16 |
| CDX92933 | Canola | cytosol, plastid | 79.86 | 84.04 |
| Bra001855.1-P | Field mustard | cytosol | 67.54 | 83.09 |
| CDX92931 | Canola | mitochondrion, nucleus | 49.05 | 81.18 |
| CDY24282 | Canola | mitochondrion | 44.79 | 61.97 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 60.66 | 57.53 |
| KRH26707 | Soybean | cytosol | 54.5 | 54.5 |
| KRH22612 | Soybean | cytosol | 54.74 | 54.35 |
| Solyc11g071840.1.1 | Tomato | cytosol | 57.35 | 54.02 |
| KRH39086 | Soybean | cytosol | 53.55 | 52.07 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 52.84 | 50.68 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 49.76 | 47.84 |
| Os03t0787200-01 | Rice | cytosol | 47.63 | 47.63 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 48.82 | 47.47 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 45.5 | 44.65 |
| Os12t0619000-01 | Rice | cytosol | 46.68 | 44.57 |
| EER90769 | Sorghum | mitochondrion | 46.21 | 44.32 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 44.79 | 43.95 |
| Zm00001d034366_P003 | Maize | mitochondrion | 46.21 | 43.62 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 44.08 | 43.36 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 44.08 | 43.26 |
| KXG24027 | Sorghum | cytosol | 44.79 | 42.95 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 43.6 | 42.4 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 43.13 | 42.33 |
| Os03t0648300-01 | Rice | cytosol | 43.13 | 41.36 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 43.13 | 41.08 |
| EER91163 | Sorghum | cytosol | 40.28 | 40.28 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 41.23 | 39.91 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 40.76 | 39.45 |
| Zm00001d033211_P002 | Maize | cytosol | 40.05 | 39.39 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 40.76 | 39.27 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 40.28 | 38.81 |
| Zm00001d031098_P004 | Maize | cytosol | 45.73 | 38.22 |
| Zm00001d013112_P011 | Maize | mitochondrion | 44.55 | 37.3 |
| AT2G26180.1 | Thale cress | cytosol | 33.65 | 34.13 |
| AT2G33990.1 | Thale cress | cytosol | 19.67 | 31.56 |
| AT1G72670.1 | Thale cress | cytosol | 29.15 | 29.71 |
| AT1G17480.1 | Thale cress | cytosol | 25.83 | 29.38 |
| AT3G15050.1 | Thale cress | plastid | 17.3 | 28.19 |
| AT3G52290.1 | Thale cress | cytosol | 27.01 | 26.51 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 26.78 | 24.51 |
| AT4G10640.1 | Thale cress | nucleus | 22.99 | 22.93 |
| AT3G49260.3 | Thale cress | nucleus | 24.17 | 21.61 |
| AT3G09710.2 | Thale cress | nucleus | 23.7 | 21.37 |
| AT3G49380.1 | Thale cress | nucleus | 17.77 | 21.31 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 25.59 | 20.22 |
| AT1G01110.2 | Thale cress | nucleus | 24.88 | 19.92 |
| AT3G59690.2 | Thale cress | nucleus | 22.75 | 18.57 |
| AT2G26410.2 | Thale cress | cytosol | 22.75 | 18.22 |
| AT2G43680.1 | Thale cress | nucleus | 21.8 | 13.75 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EntrezGene:821783 | UniProt:A0A178VHN2 | ProteinID:AEE76599.1 | ProteinID:AEE76600.1 |
| ProteinID:ANM63858.1 | ProteinID:ANM63859.1 | ArrayExpress:AT3G22190 | EnsemblPlantsGene:AT3G22190 | RefSeq:AT3G22190 | TAIR:AT3G22190 |
| RefSeq:AT3G22190-TAIR-G | EnsemblPlants:AT3G22190.2 | TAIR:AT3G22190.2 | Unigene:At.53436 | UniProt:F4J061 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR000048 | Symbol:IQD5 |
| InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_001189946.1 | RefSeq:NP_001319617.1 | RefSeq:NP_001325926.1 | RefSeq:NP_188858.4 | ProteinID:OAP05264.1 |
| PFAM:PF00612 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 |
| SMART:SM00015 | UniParc:UPI0001A7B06E | SEG:seg | : | : | : |
Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
Coordinates
chr3:-:7830905..7834135
Molecular Weight (calculated)
46901.3 Da
IEP (calculated)
11.055
GRAVY (calculated)
-0.847
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.