Factsheet for GSMUA_Achr5P02600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P31410_001	Banana	cytosol	78.13	77.95
GSMUA_Achr4P22800_001	Banana	cytosol	70.61	71.43
VIT_06s0009g00210.t01	Wine grape	cytosol	55.58	54.83
KRH26707	Soybean	cytosol	51.03	53.08
Solyc11g071840.1.1	Tomato	cytosol	53.99	52.9
Os03t0787200-01	Rice	cytosol	50.34	52.37
KRH22612	Soybean	cytosol	50.57	52.24
CDY37387	Canola	cytosol	45.33	51.82
Bra031331.1-P	Field mustard	cytosol	45.1	51.56
KRH39086	Soybean	cytosol	49.66	50.23
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	48.97	50.0
AT3G22190.2	Thale cress	cytosol	47.84	49.76
CDY10618	Canola	cytosol	46.01	49.75
CDX92933	Canola	cytosol, plastid	44.87	49.13
KXG24027	Sorghum	cytosol	49.2	49.09
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	48.06	49.07
CDY24286	Canola	cytosol	45.1	49.01
Os12t0619000-01	Rice	cytosol	49.2	48.87
EER90769	Sorghum	mitochondrion	48.75	48.64
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	47.15	48.14
Zm00001d034366_P003	Maize	mitochondrion	47.61	46.76
Bra001855.1-P	Field mustard	cytosol	35.99	46.06
HORVU5Hr1G007780.1	Barley	cytosol	44.87	45.92
CDX92931	Canola	mitochondrion, nucleus	26.42	45.49
TraesCS5D01G037300.2	Wheat	nucleus	44.42	45.35
TraesCS5A01G029600.3	Wheat	nucleus	44.65	45.16
TraesCS5B01G028200.1	Wheat	nucleus	45.1	44.7
CDY39505	Canola	cytosol	40.09	44.56
EER91163	Sorghum	cytosol	41.91	43.6
TraesCS5B01G375000.1	Wheat	nucleus	43.28	43.58
TraesCS5A01G373000.1	Wheat	nucleus	43.05	43.35
HORVU5Hr1G092660.2	Barley	nucleus	43.05	43.15
TraesCS5D01G382500.1	Wheat	nucleus	42.82	42.92
Os03t0648300-01	Rice	cytosol	42.82	42.73
Bra023846.1-P	Field mustard	cytosol	40.09	42.21
Zm00001d033211_P002	Maize	cytosol	41.23	42.19
CDY58749	Canola	cytosol	43.74	42.11
Zm00001d031098_P004	Maize	cytosol	48.06	41.78
Zm00001d013112_P011	Maize	mitochondrion	46.47	40.48
CDY24282	Canola	mitochondrion	26.88	38.69
GSMUA_Achr6P02050_001	Banana	cytosol	12.53	35.48
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	30.3	32.28
GSMUA_Achr6P04930_001	Banana	cytosol	29.84	32.27
GSMUA_Achr10P...	Banana	cytosol	30.3	31.44
GSMUA_Achr2P16650_001	Banana	nucleus	29.61	30.66
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	19.82	28.34
GSMUA_Achr2P20050_001	Banana	nucleus	18.91	28.04
GSMUA_Achr2P15730_001	Banana	cytosol	27.79	27.66
GSMUA_Achr10P...	Banana	nucleus	27.79	27.11
GSMUA_Achr3P17820_001	Banana	cytosol	28.7	26.36
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	26.2	25.05
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	25.97	24.73
GSMUA_Achr6P14440_001	Banana	nucleus	9.57	24.56
GSMUA_Achr7P22680_001	Banana	cytosol	25.97	24.52
GSMUA_Achr7P18240_001	Banana	cytosol	26.2	24.36
GSMUA_Achr1P18950_001	Banana	nucleus	25.28	24.24
GSMUA_Achr10P...	Banana	cytosol	23.01	23.93
GSMUA_Achr1P16160_001	Banana	nucleus	24.37	23.88
GSMUA_Achr10P...	Banana	cytosol	22.78	22.12
GSMUA_Achr11P...	Banana	mitochondrion	21.64	20.56
GSMUA_Achr7P02870_001	Banana	mitochondrion	12.53	18.27
GSMUA_Achr8P32220_001	Banana	cytosol	17.08	17.16

Protein Annotations

EnsemblPlants:GSMUA_Achr5P02600_001	EnsemblPlants:GSMUA_Achr5T02600_001	EnsemblPlantsGene:GSMUA_Achr5G02600_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF12	PFAM:PF00612
PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002961515	UniProt:M0SV39	MapMan:35.2

Description

IQ calmodulin-binding motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G02600_001]

Coordinates

chr5:-:1678288..1689196

Molecular Weight (calculated)

48483.6 Da

IEP (calculated)

10.800

GRAVY (calculated)

-0.677

Length

439 amino acids

Sequence
(BLAST)

001: MGISSKWLRS LVGIRKQENL QRPENGKNKS ASANSLCSQK KNPVGLDCVM MEDEFAPAVA PYAGNANIQS NSNYASSPTI SENRQLAYQT QQSMREEWAA
101: IVIQSAFRAF LARRALRALK GLVRLQALVR GHAVRKQAAI TLRCMQALVR VQARVRARRV RMALESQLGC QQVQEQQSHE AHVREIEEGW CDSVGSVEEI
201: QAKLLKRQQA AAKRERAMAY AVTHQWQAGS RKAAAAAAGF EPDKDSWGWN WLERWMAVRP WENRFLDISL KDGVKVNENG KAEEKGGISG IKTLYKSTGK
301: RPISTLHSNT LIHKSLPSAS DGSNSSSNWS ASVLAPSFPS GKPKQKPSLE EVYAEATSRA SGVGARSYSN PKERPFQLES QAKRLSLPNS GLGAGKHTAN
401: KVAVNRSTIQ RPLKDPQKSE TKHQKSPKDP ASERPNVQI

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.