Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92933 | Canola | cytosol, plastid | 95.79 | 96.51 |
| Bra001855.1-P | Field mustard | cytosol | 77.23 | 90.96 |
| CDX92931 | Canola | mitochondrion, nucleus | 56.19 | 89.02 |
| CDY10618 | Canola | cytosol | 83.66 | 83.25 |
| CDY37387 | Canola | cytosol | 78.22 | 82.29 |
| AT3G22190.2 | Thale cress | cytosol | 84.16 | 80.57 |
| CDY39505 | Canola | cytosol | 73.51 | 75.19 |
| CDY58749 | Canola | cytosol | 76.24 | 67.54 |
| CDY24282 | Canola | mitochondrion | 50.49 | 66.89 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 59.16 | 53.71 |
| KRH26707 | Soybean | cytosol | 54.7 | 52.37 |
| KRH22612 | Soybean | cytosol | 54.7 | 52.0 |
| Solyc11g071840.1.1 | Tomato | cytosol | 57.18 | 51.56 |
| KRH39086 | Soybean | cytosol | 53.22 | 49.54 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 51.49 | 47.27 |
| Os03t0787200-01 | Rice | cytosol | 48.27 | 46.21 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 49.01 | 45.1 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 47.77 | 44.47 |
| Os12t0619000-01 | Rice | cytosol | 48.27 | 44.12 |
| EER90769 | Sorghum | mitochondrion | 47.77 | 43.86 |
| Zm00001d034366_P003 | Maize | mitochondrion | 48.27 | 43.62 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 46.29 | 43.49 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 46.29 | 43.49 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 46.04 | 43.26 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 45.79 | 43.12 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 46.04 | 42.86 |
| KXG24027 | Sorghum | cytosol | 46.29 | 42.5 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 44.8 | 42.09 |
| Os03t0648300-01 | Rice | cytosol | 45.79 | 42.05 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 45.05 | 41.08 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 42.82 | 39.68 |
| CDX96427 | Canola | cytosol | 23.76 | 39.51 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 42.57 | 39.45 |
| EER91163 | Sorghum | cytosol | 40.84 | 39.1 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 42.33 | 39.04 |
| Zm00001d033211_P002 | Maize | cytosol | 41.09 | 38.69 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 41.58 | 38.36 |
| Zm00001d031098_P004 | Maize | cytosol | 47.77 | 38.22 |
| Zm00001d013112_P011 | Maize | mitochondrion | 46.78 | 37.5 |
| CDX72935 | Canola | cytosol | 24.01 | 36.88 |
| CDY17214 | Canola | cytosol, plastid | 22.52 | 34.34 |
| CDY27925 | Canola | plastid | 22.52 | 34.34 |
| CDX77034 | Canola | cytosol | 32.92 | 33.59 |
| CDY35313 | Canola | nucleus | 32.67 | 33.25 |
| CDY32322 | Canola | cytosol, plastid | 20.54 | 32.05 |
| CDY20099 | Canola | cytosol | 20.79 | 31.82 |
| CDY62768 | Canola | cytosol | 20.79 | 30.32 |
| CDY26241 | Canola | nucleus | 26.24 | 28.27 |
| CDY48305 | Canola | nucleus | 26.24 | 28.27 |
| CDY11238 | Canola | cytosol, plastid | 27.23 | 26.63 |
| CDX80849 | Canola | cytosol, plastid | 27.72 | 26.29 |
| CDY55696 | Canola | nucleus, plastid | 27.72 | 25.63 |
| CDY04876 | Canola | nucleus, plastid | 28.22 | 25.62 |
| CDX95328 | Canola | cytosol | 27.23 | 24.72 |
| CDY23202 | Canola | cytosol | 27.23 | 24.72 |
| CDY10410 | Canola | cytosol, plastid | 26.73 | 24.32 |
| CDX90766 | Canola | nucleus | 24.01 | 22.51 |
| CDY15200 | Canola | nucleus | 28.47 | 22.5 |
| CDX90011 | Canola | nucleus | 28.22 | 22.44 |
| CDY05111 | Canola | nucleus | 23.76 | 22.38 |
| CDX70333 | Canola | cytosol | 26.49 | 22.29 |
| CDY05917 | Canola | mitochondrion, nucleus | 25.99 | 22.11 |
| CDY08120 | Canola | mitochondrion, nucleus | 25.74 | 21.94 |
| CDX86983 | Canola | nucleus | 25.25 | 21.47 |
| CDY00196 | Canola | nucleus | 25.25 | 21.47 |
| CDY38525 | Canola | cytosol | 21.78 | 21.31 |
| CDY08131 | Canola | nucleus | 17.82 | 20.93 |
| CDY05931 | Canola | nucleus | 17.82 | 20.45 |
| CDX91859 | Canola | mitochondrion, nucleus | 25.99 | 19.81 |
| CDY69140 | Canola | mitochondrion, nucleus | 25.25 | 19.43 |
| CDY05984 | Canola | nucleus | 23.76 | 19.39 |
| CDX71881 | Canola | nucleus | 23.51 | 19.23 |
| CDY05918 | Canola | mitochondrion | 14.6 | 18.79 |
| CDY30433 | Canola | cytosol | 20.79 | 18.67 |
| CDX83237 | Canola | cytosol | 22.52 | 17.95 |
| CDY23391 | Canola | cytosol | 20.3 | 17.79 |
| CDX73992 | Canola | nucleus | 20.79 | 17.61 |
| CDY41307 | Canola | cytosol | 23.76 | 17.55 |
| CDY07937 | Canola | nucleus | 20.54 | 17.36 |
| CDY22198 | Canola | cytosol | 23.02 | 16.64 |
| CDX79809 | Canola | nucleus | 22.03 | 14.88 |
| CDY66694 | Canola | nucleus | 22.03 | 14.86 |
| CDX83468 | Canola | plasma membrane | 20.05 | 14.7 |
| CDY44247 | Canola | nucleus | 19.55 | 14.21 |
| CDX72934 | Canola | nucleus, plastid | 2.72 | 10.78 |
| CDX96426 | Canola | nucleus, plastid | 2.72 | 10.78 |
Protein Annotations
| EnsemblPlants:CDY24286 | EnsemblPlantsGene:GSBRNA2T00026453001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDY24286 | ProteinID:CDY24286.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EF23A8 | UniProt:A0A078GFY2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g42590DBnaC03g42590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFY2]
Coordinates
chrLK032156:-:308721..310938
Molecular Weight (calculated)
44903.1 Da
IEP (calculated)
11.233
GRAVY (calculated)
-0.732
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGRWIKA LVGFTKSDKS KSSKKDDNVN IATKSRFGRK HSVDFNAEKF QDGLEDLNFH SVIDAGVSTS TSLQSYAAPC EEQRKEHMAA TRIQSAFRAF
101: LARRALRALK GLVRLQALVR GHVVRKQAAV TLRCMQALVR VQARVRARRV RLSLECETGQ QTLQQQVTDE ARVREIEEGW CDSIGSVEQI QAKLVKRQEA
201: AAKRERAMAY ALTHQWQAGT RQLSAHSGFQ PDKNSWGWNW LERWMAVRPW ENRFLDSSNL REDANLNNME QCENVHRTQM KSASRMPNTS SLVSGGVSSG
301: KATGPSLSDN DSSSPGSIPV LSKARSKLAK DDLAVEVNSS RPGAVPRSHS NPKERSSKER LSLPNTGKSL GSQSAKAIRA GKLTQTSAQN QRRRNSDPIR
401: QRLA
101: LARRALRALK GLVRLQALVR GHVVRKQAAV TLRCMQALVR VQARVRARRV RLSLECETGQ QTLQQQVTDE ARVREIEEGW CDSIGSVEQI QAKLVKRQEA
201: AAKRERAMAY ALTHQWQAGT RQLSAHSGFQ PDKNSWGWNW LERWMAVRPW ENRFLDSSNL REDANLNNME QCENVHRTQM KSASRMPNTS SLVSGGVSSG
301: KATGPSLSDN DSSSPGSIPV LSKARSKLAK DDLAVEVNSS RPGAVPRSHS NPKERSSKER LSLPNTGKSL GSQSAKAIRA GKLTQTSAQN QRRRNSDPIR
401: QRLA
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.