Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P35280_001 | Banana | endoplasmic reticulum | 60.0 | 30.29 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 69.03 | 23.21 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 66.45 | 22.99 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 58.06 | 19.65 |
| VIT_16s0098g01070.t01 | Wine grape | mitochondrion, nucleus | 50.32 | 16.88 |
| CDY05111 | Canola | nucleus | 46.45 | 16.78 |
| Bra000717.1-P | Field mustard | nucleus | 45.81 | 16.44 |
| CDX90766 | Canola | nucleus | 45.16 | 16.24 |
| VIT_02s0025g02690.t01 | Wine grape | mitochondrion, nucleus | 55.48 | 16.1 |
| VIT_15s0048g02680.t01 | Wine grape | nucleus | 57.42 | 15.98 |
| AT4G10640.1 | Thale cress | nucleus | 41.94 | 15.37 |
| Solyc10g005000.2.1 | Tomato | nucleus | 38.71 | 15.23 |
| KRH47821 | Soybean | nucleus | 53.55 | 15.2 |
| KRH06386 | Soybean | mitochondrion, nucleus | 53.55 | 15.09 |
| CDX90011 | Canola | nucleus | 47.1 | 14.37 |
| PGSC0003DMT400031576 | Potato | nucleus | 45.81 | 14.31 |
| CDY15200 | Canola | nucleus | 47.1 | 14.29 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 49.03 | 14.23 |
| CDY08131 | Canola | nucleus | 30.97 | 13.95 |
| Solyc08g083240.2.1 | Tomato | nucleus | 43.87 | 13.91 |
| Bra033284.1-P | Field mustard | nucleus | 47.1 | 13.88 |
| Bra017988.1-P | Field mustard | nucleus | 30.97 | 13.71 |
| CDY05931 | Canola | nucleus | 30.97 | 13.64 |
| CDX91859 | Canola | mitochondrion, nucleus | 46.45 | 13.58 |
| CDY69140 | Canola | mitochondrion, nucleus | 45.81 | 13.52 |
| Bra000930.1-P | Field mustard | mitochondrion, nucleus | 45.81 | 13.52 |
| AT1G01110.2 | Thale cress | nucleus | 45.81 | 13.47 |
| AT3G49380.1 | Thale cress | nucleus | 30.32 | 13.35 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 36.13 | 12.9 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 35.48 | 12.53 |
| PGSC0003DMT400038175 | Potato | cytosol | 40.65 | 12.19 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 34.19 | 12.05 |
| Solyc01g009340.2.1 | Tomato | nucleus | 30.97 | 11.91 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 30.97 | 11.65 |
| GSMUA_Achr10P... | Banana | cytosol | 31.61 | 11.58 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 30.32 | 11.58 |
| GSMUA_Achr10P... | Banana | cytosol | 33.55 | 11.5 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 30.97 | 11.32 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 30.97 | 10.88 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 32.26 | 10.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.32 | 10.24 |
| GSMUA_Achr10P... | Banana | nucleus | 29.68 | 10.22 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 21.29 | 9.94 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 30.32 | 9.83 |
| GSMUA_Achr2P20050_001 | Banana | nucleus | 18.71 | 9.8 |
| GSMUA_Achr10P... | Banana | cytosol | 24.52 | 9.0 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 26.45 | 8.69 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 23.87 | 8.47 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.16 | 8.44 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 14.84 | 7.64 |
| GSMUA_Achr6P14440_001 | Banana | nucleus | 1.94 | 1.75 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P02050_001 | EnsemblPlants:GSMUA_Achr6T02050_001 | EnsemblPlantsGene:GSMUA_Achr6G02050_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF50 | PFscan:PS50096 | SEG:seg |
| UniParc:UPI000294ED4E | UniProt:M0T3F3 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G02050_001]
Coordinates
chr6:+:1320033..1320592
Molecular Weight (calculated)
17456.8 Da
IEP (calculated)
11.119
GRAVY (calculated)
0.097
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKATTAIAQ AVAKVVCLIR PSASFVKEHY VAIVIQTAFE VIWRGGLLQA LKGLMKLQAL VRGHNVRKQA NMTLRCMQAL VRVQASVRDQ RMRLAQELSA
101: AVSRGSNKSS FNCYTSFWES KHLQELAERR SMVTNMSLRK PKLSFLVMCL PYLVE
101: AVSRGSNKSS FNCYTSFWES KHLQELAERR SMVTNMSLRK PKLSFLVMCL PYLVE
001: MGKKNGSSSW LTAVKRAFRS PTKKDHSNDV EEDEEKKREK RRWFRKPATQ ESPVKSSGIS PPAPQEDSLN VNSKPSPETA PSYATTTPPS NAGKPPSAVV
101: PIATSASKTL APRRIYYARE NYAAVVIQTS FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QAKMTLRCMQ ALVRVQSRVL DQRKRLSHDG SRKSAFSDSH
201: AVFESRYLQD LSDRQSMSRE GSSAAEDWDD RPHTIDAVKV MLQRRRDTAL RHDKTNLSQA FSQKMWRTVG NQSTEGHHEV ELEEERPKWL DRWMATRPWD
301: KRASSRASVD QRVSVKTVEI DTSQPYSRTG AGSPSRGQRP SSPSRTSHHY QSRNNFSATP SPAKSRPILI RSASPRCQRD PREDRDRAAY SYTSNTPSLR
401: SNYSFTARSG CSISTTMVNN ASLLPNYMAS TESAKARIRS HSAPRQRPST PERDRAGLVK KRLSYPVPPP AEYEDNNSLR SPSFKSVAGS HFGGMLEQQS
501: NYSSCCTESN GVEISPASTS DFRNWLR
101: PIATSASKTL APRRIYYARE NYAAVVIQTS FRGYLARRAL RALKGLVKLQ ALVRGHNVRK QAKMTLRCMQ ALVRVQSRVL DQRKRLSHDG SRKSAFSDSH
201: AVFESRYLQD LSDRQSMSRE GSSAAEDWDD RPHTIDAVKV MLQRRRDTAL RHDKTNLSQA FSQKMWRTVG NQSTEGHHEV ELEEERPKWL DRWMATRPWD
301: KRASSRASVD QRVSVKTVEI DTSQPYSRTG AGSPSRGQRP SSPSRTSHHY QSRNNFSATP SPAKSRPILI RSASPRCQRD PREDRDRAAY SYTSNTPSLR
401: SNYSFTARSG CSISTTMVNN ASLLPNYMAS TESAKARIRS HSAPRQRPST PERDRAGLVK KRLSYPVPPP AEYEDNNSLR SPSFKSVAGS HFGGMLEQQS
501: NYSSCCTESN GVEISPASTS DFRNWLR
Arabidopsis Description
IQD18IQ-domain 18 [Source:UniProtKB/TrEMBL;Acc:Q9MAM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.