Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023467 | Potato | nucleus | 96.38 | 96.38 |
| VIT_16s0098g01790.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 55.86 | 56.71 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 55.01 | 56.33 |
| KRH53505 | Soybean | cytosol | 53.52 | 56.28 |
| KRH64435 | Soybean | nucleus | 55.44 | 56.16 |
| Solyc06g052010.1.1 | Tomato | cytosol | 46.48 | 54.91 |
| AT3G49260.3 | Thale cress | nucleus | 47.33 | 47.03 |
| CDY05917 | Canola | mitochondrion, nucleus | 46.7 | 46.11 |
| Bra017997.1-P | Field mustard | nucleus, plastid | 46.27 | 45.68 |
| CDY08120 | Canola | mitochondrion, nucleus | 44.99 | 44.51 |
| CDX86983 | Canola | nucleus | 44.78 | 44.21 |
| GSMUA_Achr10P... | Banana | cytosol | 42.43 | 44.03 |
| Bra019589.1-P | Field mustard | nucleus | 44.35 | 43.79 |
| CDY00196 | Canola | nucleus | 44.35 | 43.79 |
| CDY05918 | Canola | mitochondrion | 24.31 | 36.31 |
| Solyc08g062940.2.1 | Tomato | cytosol | 21.54 | 32.69 |
| Solyc04g050050.2.1 | Tomato | cytosol | 26.44 | 31.47 |
| Solyc10g084280.1.1 | Tomato | nucleus | 30.06 | 29.5 |
| Solyc09g007410.2.1 | Tomato | cytosol | 29.85 | 28.99 |
| Solyc10g086060.1.1 | Tomato | cytosol | 29.0 | 28.87 |
| Solyc11g071840.1.1 | Tomato | cytosol | 24.52 | 25.67 |
| Solyc02g077260.2.1 | Tomato | nucleus | 16.2 | 25.17 |
| Solyc08g083240.2.1 | Tomato | nucleus | 25.8 | 24.74 |
| Solyc12g014130.1.1 | Tomato | nucleus | 13.43 | 24.14 |
| Solyc03g121760.2.1 | Tomato | cytosol | 21.96 | 24.01 |
| Solyc10g005000.2.1 | Tomato | nucleus | 19.83 | 23.6 |
| Solyc10g008790.2.1 | Tomato | cytosol | 15.14 | 23.36 |
| Solyc08g014280.2.1 | Tomato | cytosol | 23.67 | 20.59 |
| Solyc06g053450.2.1 | Tomato | nucleus | 23.03 | 18.24 |
| Solyc01g009340.2.1 | Tomato | nucleus | 14.93 | 17.37 |
Protein Annotations
| EnsemblPlants:Solyc03g083100.2.1 | EnsemblPlantsGene:Solyc03g083100.2 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF33 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI000276892B |
| UniProt:K4BI86 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:52919754..52922669
Molecular Weight (calculated)
52459.3 Da
IEP (calculated)
10.278
GRAVY (calculated)
-0.860
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSGWFS SVKKVFKQSP KDSPDKKKET LDSKWQQPEP PEVVSLEHFP VGSSPDFISN GGSNVDSSST VAEDHNHAIA VAAATAAAAE AAVAAAHAAA
101: KVVRLAGGYG RVQSTEERAA TLIQSYYRGY LARRALRALK GLVRLQALVR GHNVRKQAQM TMRCMQALVR VQGRVRARRL QLVQERLESK LEEARRHAAE
201: EQQHKHTSPI KKSGTECWDN RNQSMDKIQE SSRRKFDAEM KRERALAYAY AYQQKQQQLL HIDPHGEDAE YFGNEREKSQ WGWSWLERWM ASQPYQYSRH
301: IVPRDSSYVT PSTTSDMSEK TVEMDLITGP LDSETINSAH HTFDQAETSP YSARKVVHSK FDNVPSYMTP TKSTKAKVRN QGLVKHRSPP SAQWNVSKRK
401: GPHYGLGLES SSGASTTAIY QASRSPSPKT TANRSSGHAN KWMATYSPES SGDDRASPLG AHPWRYNFS
101: KVVRLAGGYG RVQSTEERAA TLIQSYYRGY LARRALRALK GLVRLQALVR GHNVRKQAQM TMRCMQALVR VQGRVRARRL QLVQERLESK LEEARRHAAE
201: EQQHKHTSPI KKSGTECWDN RNQSMDKIQE SSRRKFDAEM KRERALAYAY AYQQKQQQLL HIDPHGEDAE YFGNEREKSQ WGWSWLERWM ASQPYQYSRH
301: IVPRDSSYVT PSTTSDMSEK TVEMDLITGP LDSETINSAH HTFDQAETSP YSARKVVHSK FDNVPSYMTP TKSTKAKVRN QGLVKHRSPP SAQWNVSKRK
401: GPHYGLGLES SSGASTTAIY QASRSPSPKT TANRSSGHAN KWMATYSPES SGDDRASPLG AHPWRYNFS
001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
Arabidopsis Description
iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.