Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021183 | Potato | cytosol | 96.76 | 68.89 |
| VIT_04s0008g01080.t01 | Wine grape | nucleus | 73.14 | 50.33 |
| Bra034294.1-P | Field mustard | nucleus | 62.14 | 48.36 |
| CDY35313 | Canola | nucleus | 62.14 | 48.36 |
| CDX77034 | Canola | cytosol | 61.49 | 47.98 |
| AT2G26180.1 | Thale cress | cytosol | 63.11 | 46.88 |
| KRH61522 | Soybean | cytosol | 67.96 | 46.67 |
| KRH52206 | Soybean | cytosol | 67.31 | 46.22 |
| KRH15576 | Soybean | cytosol | 62.14 | 46.04 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 62.14 | 45.28 |
| KRH05433 | Soybean | cytosol | 60.19 | 45.04 |
| TraesCS3B01G124000.1 | Wheat | cytosol | 62.46 | 44.47 |
| TraesCS3D01G107700.1 | Wheat | cytosol | 62.46 | 44.37 |
| Os01t0194200-01 | Rice | cytosol | 62.78 | 43.89 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 57.61 | 43.84 |
| TraesCS3A01G105600.1 | Wheat | cytosol, nucleus, peroxisome | 62.14 | 43.84 |
| OQU86150 | Sorghum | cytosol | 62.46 | 43.47 |
| Zm00001d039471_P001 | Maize | cytosol | 61.16 | 42.0 |
| GSMUA_Achr10P... | Banana | cytosol | 57.28 | 41.84 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 55.34 | 41.5 |
| HORVU3Hr1G019240.2 | Barley | mitochondrion, peroxisome | 61.16 | 38.18 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 54.05 | 37.87 |
| Solyc03g121760.2.1 | Tomato | cytosol | 48.54 | 34.97 |
| Solyc11g071840.1.1 | Tomato | cytosol | 44.01 | 30.36 |
| Solyc10g008790.2.1 | Tomato | cytosol | 28.16 | 28.62 |
| Solyc12g014130.1.1 | Tomato | nucleus | 23.3 | 27.59 |
| Solyc02g077260.2.1 | Tomato | nucleus | 25.89 | 26.49 |
| Solyc04g050050.2.1 | Tomato | cytosol | 33.01 | 25.89 |
| Solyc10g084280.1.1 | Tomato | nucleus | 34.3 | 22.18 |
| Solyc03g083100.2.1 | Tomato | nucleus | 32.69 | 21.54 |
| Solyc09g007410.2.1 | Tomato | cytosol | 33.33 | 21.33 |
| Solyc10g086060.1.1 | Tomato | cytosol | 30.42 | 19.96 |
| Solyc10g005000.2.1 | Tomato | nucleus | 24.92 | 19.54 |
| Solyc08g083240.2.1 | Tomato | nucleus | 29.13 | 18.4 |
| Solyc06g052010.1.1 | Tomato | cytosol | 23.3 | 18.14 |
| Solyc01g009340.2.1 | Tomato | nucleus | 21.04 | 16.13 |
| Solyc08g014280.2.1 | Tomato | cytosol | 25.57 | 14.66 |
| Solyc06g053450.2.1 | Tomato | nucleus | 21.36 | 11.15 |
Protein Annotations
| EnsemblPlants:Solyc08g062940.2.1 | EnsemblPlantsGene:Solyc08g062940.2 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF86 | PFAM:PF00612 | PFscan:PS50096 | SEG:seg | SMART:SM00015 |
| UniParc:UPI000276B4BF | UniProt:K4CL77 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr8:+:52373495..52375614
Molecular Weight (calculated)
35224.7 Da
IEP (calculated)
10.868
GRAVY (calculated)
-0.735
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGKWVKA LIGFKKSEKE DHEKKVKKWK IWRSDVKGLK QRNGVGSEGS DCSSMNNDAY TAAVAAVVRA PPKDFKAVRE EWAAIRIQTT FRGFLARRAF
101: RALKGLVRLQ ALVRGRQVRK QAAVTLRCMQ ALVRVQARVR ARRVRMSIEG QAVQKILEEH RGKLDPMKEA EEGWCDSKGT LEEVKTKIHM RQEGVLKRER
201: ALAYSQAQKQ SKSSQNFDSR TTISVPSLKN LDYDKSNCGW SWLERWMAAR PWENRLMEQA YTDSMETTPK SKACLETLKD KEKATTEPCS VKVKKNNVTK
301: RISAKPPLI
101: RALKGLVRLQ ALVRGRQVRK QAAVTLRCMQ ALVRVQARVR ARRVRMSIEG QAVQKILEEH RGKLDPMKEA EEGWCDSKGT LEEVKTKIHM RQEGVLKRER
201: ALAYSQAQKQ SKSSQNFDSR TTISVPSLKN LDYDKSNCGW SWLERWMAAR PWENRLMEQA YTDSMETTPK SKACLETLKD KEKATTEPCS VKVKKNNVTK
301: RISAKPPLI
001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
Arabidopsis Description
IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.