CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52206	Soybean	cytosol	92.67	92.67
KRH05433	Soybean	cytosol	70.0	76.27
KRH15576	Soybean	cytosol	69.33	74.82
VIT_04s0008g01080.t01	Wine grape	nucleus	71.78	71.94
PGSC0003DMT400021183	Potato	cytosol	66.22	68.66
Solyc08g062940.2.1	Tomato	cytosol	46.67	67.96
AT2G26180.1	Thale cress	cytosol	58.0	62.74
Bra034294.1-P	Field mustard	nucleus	54.0	61.21
CDX77034	Canola	cytosol	53.78	61.11
CDY35313	Canola	nucleus	53.78	60.96
GSMUA_Achr6P04930_001	Banana	cytosol	50.67	56.16
Os01t0194200-01	Rice	cytosol	54.44	55.43
TraesCS3B01G124000.1	Wheat	cytosol	53.33	55.3
TraesCS3D01G107700.1	Wheat	cytosol	53.33	55.17
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	53.33	54.79
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	50.0	54.61
OQU86150	Sorghum	cytosol	53.33	54.05
GSMUA_Achr2P16650_001	Banana	nucleus	50.44	53.54
Zm00001d039471_P001	Maize	cytosol	53.33	53.33
GSMUA_Achr10P...	Banana	cytosol	48.67	51.77
GSMUA_Achr2P15730_001	Banana	cytosol	48.22	49.21
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	52.89	48.08
KRH10035	Soybean	cytosol	42.89	46.39
KRH23285	Soybean	nucleus	41.78	45.63
KRH44124	Soybean	mitochondrion	42.44	45.37
KRH47099	Soybean	cytosol	43.11	42.08
KRH22612	Soybean	cytosol	33.56	35.53
KRH39086	Soybean	cytosol	33.78	35.02
KRH26707	Soybean	cytosol	32.22	34.36
KRH21320	Soybean	cytosol	20.67	31.1
KRH10977	Soybean	cytosol	20.67	30.19
KRH50151	Soybean	cytosol	18.22	28.28
KRH32840	Soybean	mitochondrion, nucleus	8.0	27.27
KRH27315	Soybean	cytosol	17.78	27.21
KRH55128	Soybean	mitochondrion, nucleus	17.78	27.03
KRH20344	Soybean	cytosol	17.56	26.6
KRH64435	Soybean	nucleus	27.11	26.35
KRH57858	Soybean	cytosol	26.44	26.21
KRG95941	Soybean	nucleus	27.78	26.21
KRH53505	Soybean	cytosol	25.56	25.78
KRH19825	Soybean	cytosol	26.89	25.74
KRH67648	Soybean	nucleus	27.11	25.58
KRH32420	Soybean	cytosol	26.67	25.32
KRH04761	Soybean	cytosol	27.11	25.26
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	25.33	24.89
KRH34906	Soybean	cytosol	25.56	23.81
KRG91856	Soybean	cytosol	25.11	23.11
KRH47821	Soybean	nucleus	28.0	23.08
KRH22000	Soybean	plastid	17.56	23.03
KRH06386	Soybean	mitochondrion, nucleus	28.0	22.91
KRH37691	Soybean	mitochondrion	8.22	20.44
KRH71267	Soybean	cytosol	21.78	18.32
KRH50198	Soybean	cytosol	21.33	18.01

Protein Annotations

EMBL:ACUP02002171	EnsemblPlants:KRH61522	EnsemblPlantsGene:GLYMA_04G052200	EntrezGene:100799714	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86
PFAM:PF00612	PFscan:PS50096	ProteinID:KRH61522	ProteinID:KRH61522.1	SEG:seg	UniParc:UPI000233A940
UniProt:I1JTX8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:4237046..4239567

Molecular Weight (calculated)

49870.1 Da

IEP (calculated)

11.226

GRAVY (calculated)

-0.706

Length

450 amino acids

Sequence
(BLAST)

001: MGASGKWVKA LIGLKKPDKD DHVKEGGGKS KRWRLWRSSS GDTGGSWKGF KGGNYRAASE VGSDSSPPVV AADADAAFTA AVATVVRAPP KDFRLVKQEW
101: AAIRIQTAFR AFLARRALRA LKGVVRIQAL VRGRQVRKQA AVTLRCMQAL VRVQARVRAR RVRMSIEGQA VQNLLNERRS KLDLLKQAEE GWCDSRGTLE
201: DVKTKIQMRQ EGAFKRERAM AYSLAHKQCR STPSSNSRTN ASFSSLKSHE MNKANGGWSW LERWMAAKPW ESRLMEQSQS QAEALDKTPT PKKFVESFVS
301: SNSKPCTVKV KKNNVTTRVF ARPPLVGQAT RSSSSPSSEF RYDESSASSS ICTSTTPMSG NTCDRTEDSN GNAVARPNYM NLTQSTKAKQ KTSSNHVYNR
401: AQRQQSMDEF QFLKRAAVFS NGDSKSTAGS DPSINFSRPL HLDKSSVMTR

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.