CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22000	Soybean	plastid	89.8	76.97
KRH55128	Soybean	mitochondrion, nucleus	68.03	67.57
KRH32840	Soybean	mitochondrion, nucleus	23.47	52.27
AT3G15050.1	Thale cress	plastid	42.52	48.26
CDY20099	Canola	cytosol	43.2	48.11
CDY32322	Canola	cytosol, plastid	42.18	47.88
Bra021588.1-P	Field mustard	cytosol, plastid	42.18	46.97
VIT_19s0014g01690.t01	Wine grape	cytosol	47.28	44.98
HORVU7Hr1G024060.1	Barley	plastid	26.53	44.32
Solyc12g014130.1.1	Tomato	nucleus	38.78	43.68
KRH20344	Soybean	cytosol	43.88	43.43
KRH50151	Soybean	cytosol	42.52	43.1
PGSC0003DMT400039646	Potato	mitochondrion	42.86	42.57
KRH10977	Soybean	cytosol	44.56	42.53
KRH21320	Soybean	cytosol	43.2	42.47
KRH37691	Soybean	mitochondrion	23.81	38.67
GSMUA_Achr6P14440_001	Banana	nucleus	21.77	37.43
GSMUA_Achr2P20050_001	Banana	nucleus	36.73	36.49
TraesCS7A01G112000.1	Wheat	nucleus	39.8	35.78
TraesCS7B01G010100.1	Wheat	nucleus	39.8	35.78
TraesCS7D01G107600.2	Wheat	nucleus	39.8	35.78
HORVU7Hr1G023980.1	Barley	nucleus	39.8	35.78
EER87873	Sorghum	nucleus	40.48	35.74
Zm00001d045305_P001	Maize	nucleus	39.46	34.63
Os06t0155300-01	Rice	plasma membrane	40.14	33.43
Zm00001d009320_P001	Maize	nucleus	18.03	22.94
KRH26707	Soybean	cytosol	31.63	22.04
KRH22612	Soybean	cytosol	31.63	21.88
KRH15576	Soybean	cytosol	28.23	19.9
KRH57858	Soybean	cytosol	30.61	19.82
KRH05433	Soybean	cytosol	27.55	19.61
KRH39086	Soybean	cytosol	28.91	19.59
KRH04761	Soybean	cytosol	30.95	18.84
KRG95941	Soybean	nucleus	30.27	18.66
KRH19825	Soybean	cytosol	29.59	18.51
KRH52206	Soybean	cytosol	27.89	18.22
KRH67648	Soybean	nucleus	29.25	18.03
KRH23285	Soybean	nucleus	25.17	17.96
KRH32420	Soybean	cytosol	28.91	17.93
KRH61522	Soybean	cytosol	27.21	17.78
KRH10035	Soybean	cytosol	24.83	17.55
KRH34906	Soybean	cytosol	28.23	17.18
KRG91856	Soybean	cytosol	27.55	16.56
KRH53505	Soybean	cytosol	23.13	15.25
KRH64435	Soybean	nucleus	23.13	14.69
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	22.79	14.63
KRH44124	Soybean	mitochondrion	20.75	14.49
KRH50198	Soybean	cytosol	25.17	13.88
KRH71267	Soybean	cytosol	24.83	13.64
KRH47821	Soybean	nucleus	25.17	13.55
KRH47099	Soybean	cytosol	21.09	13.45
KRH06386	Soybean	mitochondrion, nucleus	24.83	13.27

Protein Annotations

EMBL:ACUP02007798	EnsemblPlants:KRH27315	EnsemblPlantsGene:GLYMA_12G228200	EntrezGene:100775825	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93	PFscan:PS50096
ProteinID:KRH27315	ProteinID:KRH27315.1	ProteinID:KRH27316.1	SEG:seg	UniParc:UPI000296E06F	UniProt:K7LWF9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:38808624..38812486

Molecular Weight (calculated)

34219.8 Da

IEP (calculated)

10.491

GRAVY (calculated)

-0.958

Length

294 amino acids

Sequence
(BLAST)

001: MGAKKWFKII VKLKKSKKDK SKEEKTTDEN SNEYSNGKQS TREESSSNAN EGLMMDRTVP SRLMDDIAAT RIQNAFRSFM ARRTLHHLRG AEKFEALIQD
101: HLAREQTATA LSYIHSWSRT QEQIRARRIC MITEARIKQK KLETQLKIEA KIQELEVEWC NGSETMEEII SRLHQREEAA IKRERAMAYA FSHQWRPNCS
201: QYFGQASYSL GKESWGWSWT ERWVAARPWE VRVRGQTTKT TKLNGHGQVQ KTKLDKMNQN ESKVALAKPT LSNGKERKTV LQGCQRTMYP NSPF

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.