Factsheet for Zm00001d009320_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045305_P001	Maize	nucleus	78.79	54.33
EER87873	Sorghum	nucleus	75.32	52.25
Os06t0155300-01	Rice	plasma membrane	65.37	42.78
TraesCS7D01G107600.2	Wheat	nucleus	56.71	40.06
TraesCS7A01G112000.1	Wheat	nucleus	56.71	40.06
TraesCS7B01G010100.1	Wheat	nucleus	55.41	39.14
HORVU7Hr1G023980.1	Barley	nucleus	55.41	39.14
GSMUA_Achr6P14440_001	Banana	nucleus	28.14	38.01
Bra021588.1-P	Field mustard	cytosol, plastid	28.14	24.62
CDY20099	Canola	cytosol	28.14	24.62
CDY32322	Canola	cytosol, plastid	26.84	23.94
AT3G15050.1	Thale cress	plastid	26.84	23.94
VIT_19s0014g01690.t01	Wine grape	cytosol	30.74	22.98
Solyc12g014130.1.1	Tomato	nucleus	24.24	21.46
GSMUA_Achr2P20050_001	Banana	nucleus	27.27	21.28
KRH55128	Soybean	mitochondrion, nucleus	25.54	19.93
PGSC0003DMT400039646	Potato	mitochondrion	25.54	19.93
KRH27315	Soybean	cytosol	22.94	18.03
KRH22000	Soybean	plastid	24.68	16.62
HORVU7Hr1G024060.1	Barley	plastid	10.82	14.2
Zm00001d035492_P009	Maize	cytosol	22.08	10.71
Zm00001d010975_P003	Maize	cytosol	22.08	10.67
Zm00001d042973_P007	Maize	cytosol	22.51	10.26
Zm00001d033211_P002	Maize	cytosol	18.61	10.02
Zm00001d034366_P003	Maize	mitochondrion	18.18	9.4
Zm00001d043691_P001	Maize	mitochondrion	17.75	9.34
Zm00001d039471_P001	Maize	cytosol	18.18	9.33
Zm00001d038861_P001	Maize	cytosol, plastid	17.32	9.32
Zm00001d031098_P004	Maize	cytosol	18.18	8.32
Zm00001d013112_P011	Maize	mitochondrion	17.32	7.94
Zm00001d049684_P002	Maize	cytosol, mitochondrion	16.45	6.99
Zm00001d012167_P001	Maize	cytosol	16.02	6.4
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.02	5.69

Protein Annotations

EnsemblPlants:Zm00001d009320_P001	EnsemblPlants:Zm00001d009320_T001	EnsemblPlantsGene:Zm00001d009320	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93
ProteinID:AQK91671.1	SEG:seg	UniParc:UPI0008DB34DB	UniProt:A0A1D6FIR5	MapMan:35.2	:

Description

IQ-domain 20

Coordinates

chr8:+:55172325..55174765

Molecular Weight (calculated)

25784.8 Da

IEP (calculated)

10.659

GRAVY (calculated)

-0.845

Length

231 amino acids

Sequence
(BLAST)

001: MSSTVKHVVD AQQSGTGEKD APFVVDGIEM ANIEWNGGSD TMDEILVRIQ QLEEAVVKRE RAMAYTFNHQ WRARSATSLG NFSYEVGKGG WGWSWMDRWI
101: VARPWESRSM VHPENPKKAQ AKKENTTNPL ALKLQGSITL SNNINDRKTL KKKPLPSASL TDQKKPSPSP SSDQKKPVPK EQRAKAAGTP PKPKAKYMKG
201: SQEKKPQPQQ RVSPPLSQVR STFLCTIMSS I

Best Arabidopsis Sequence Match ( AT3G15050.1 )
(BLAST)

001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG

Arabidopsis Description

IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.